Detail information of GWHGAAEX014858/evm.TU.scaffold_63.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|20094453|ref|NP_614300.1|0V-type ATP synthase subunit A [Methanopyrus kandleri AV19]
KOGKOG13520Vacuolar H+-ATPase V1 sector, subunit A
nrgi|242060700|ref|XP_002451639.1|0hypothetical protein SORBIDRAFT_04g005040 [Sorghum bicolor]
Swissprottr|P09469|VATA_DAUCA0V-type proton ATPase catalytic subunit A
trEMBLtr|C5XW73|C5XW73_SORBI0Putative uncharacterized protein Sb04g005040 {ECO:0000313|EMBL:EES04615.1}
TAIRAT1G789000vacuolar ATP synthase subunit A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000062624170654478-
Transcript Sequence

Network for GWHGAAEX014858

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02874.22ATP-synt_ab_N24831.70E-13
PF16886.4ATP-synt_ab_Xtn1002213.80E-40
PF00006.24ATP-synt_ab2304561.20E-107
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02145ATPeV1A, ATP6A Metabolic pathways map01100
Oxidative phosphorylationmap00190
mTOR signaling pathwaymap04150
Phagosomemap04145
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0046034Biological ProcessATP metabolic process
GO:1902600Biological Processhydrogen ion transmembrane transport
GO:0005524Molecular FunctionATP binding
GO:0046961Molecular Functionproton-transporting ATPase activity, rotational mechanism
GO:0033180Cellular Componentproton-transporting V-type ATPase, V1 domain

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms120.920
SRR2545915Juvenile tuber128.950
SRP108465SRR5643513five period of Gastrodia elata108.530
SRR5643514five period of Gastrodia elata101.340
SRR5643515five period of Gastrodia elata105.510
SRR5643524five period of Gastrodia elata100.930
SRR5643525five period of Gastrodia elata69.770
SRR5643528five period of Gastrodia elata81.090
SRR5643658five period of Gastrodia elata71.940
SRR5643659five period of Gastrodia elata103.890
SRR5643660five period of Gastrodia elata118.460
SRR5643661five period of Gastrodia elata111.270
SRR5643662five period of Gastrodia elata122.340
SRR5643663five period of Gastrodia elata115.140
SRR5643664five period of Gastrodia elata119.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1136.800
SRR6049655Rhizomagastrodiae_C368-T10_good_1115.410
SRR6049656Rhizomagastrodiae_C368-T07_good_1132.440
SRR6049657Rhizomagastrodiae_C368-T07_good_1127.010
SRR6049658Rhizomagastrodiae_C368-T04_good_1121.970
SRR6049659Rhizomagastrodiae_C368-T04_good_1136.520
SRR6049660Rhizomagastrodiae_C368-T01_good_1134.610
SRR6049661Rhizomagastrodiae_C368-T04_good_1118.940
SRR6049662Rhizomagastrodiae_C368-T01_good_1132.070
SRR6049663Rhizomagastrodiae_C368-T01_good_1131.140
SRR6049664Rhizomagastrodiae_C368-T10_good_1151.710
SRR6049665Rhizomagastrodiae_C368-T10_good_1151.710
SRP279888GastroGastrodia elata tuber 129.65
JuvenJuvenile tuber124.50
Mother_GastroMother tuber of Gastrodia elata 71.44
Mother_JuvenMother tuber of Juvenile 107.66