Detail information of GWHGAAEX014861/evm.TU.scaffold_63.33
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383315480|ref|YP_005376322.1| | 7.00E-09 | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase [Frateuria aurantia DSM 6220] |
| KOG | KOG3603 | 9.00E-40 | Predicted phospholipase D |
| nr | gi|743873608|ref|XP_010906870.1| | 0 | PREDICTED: phospholipase D Z-like [Elaeis guineensis] |
| trEMBL | tr|A5AJI2|A5AJI2_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN82248.1} |
| TAIR | CE09303 | 9.00E-40 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000062 | 682519 | 706010 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014861
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13091.5 | PLDc_2 | 104 | 215 | 1.40E-08 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K16860 | PLD3_4 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Glycerophospholipid metabolism | map00564 | ||
| Ether lipid metabolism | map00565 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.250 |
| SRR2545915 | Juvenile tuber | 7.010 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.440 |
| SRR5643514 | five period of Gastrodia elata | 4.690 | |
| SRR5643515 | five period of Gastrodia elata | 4.180 | |
| SRR5643524 | five period of Gastrodia elata | 4.430 | |
| SRR5643525 | five period of Gastrodia elata | 7.120 | |
| SRR5643528 | five period of Gastrodia elata | 6.470 | |
| SRR5643658 | five period of Gastrodia elata | 7.750 | |
| SRR5643659 | five period of Gastrodia elata | 4.230 | |
| SRR5643660 | five period of Gastrodia elata | 5.060 | |
| SRR5643661 | five period of Gastrodia elata | 6.140 | |
| SRR5643662 | five period of Gastrodia elata | 3.180 | |
| SRR5643663 | five period of Gastrodia elata | 4.900 | |
| SRR5643664 | five period of Gastrodia elata | 3.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.550 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.420 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.580 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.020 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.410 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.800 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.370 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 5.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 5.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.94 |
| Juven | Juvenile tuber | 4.44 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.70 | |
| Mother_Juven | Mother tuber of Juvenile | 7.91 |