Detail information of GWHGAAEX014864/evm.TU.scaffold_63.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07954.00E-98Chorismate mutase
nrgi|672193559|ref|XP_008776063.1|4.25E-118PREDICTED: chorismate mutase 2-like [Phoenix dactylifera]
Swissprottr|Q9S7H4|CM2_ARATH1.00E-98Chorismate mutase 2
trEMBLtr|M0TEW6|M0TEW6_MUSAM4.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P05260_001}
TAIRAT5G108704.00E-98chorismate mutase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000062777296799864+
Transcript Sequence

Network for GWHGAAEX014864

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01850E5.4.99.5 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Biosynthesis of amino acidsmap01230
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0046417Biological Processchorismate metabolic process
GO:0009073Biological Processaromatic amino acid family biosynthetic process
GO:0004106Molecular Functionchorismate mutase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.600
SRR2545915Juvenile tuber22.400
SRP108465SRR5643513five period of Gastrodia elata18.890
SRR5643514five period of Gastrodia elata18.080
SRR5643515five period of Gastrodia elata17.090
SRR5643524five period of Gastrodia elata18.420
SRR5643525five period of Gastrodia elata32.920
SRR5643528five period of Gastrodia elata28.860
SRR5643658five period of Gastrodia elata32.810
SRR5643659five period of Gastrodia elata21.880
SRR5643660five period of Gastrodia elata21.160
SRR5643661five period of Gastrodia elata20.600
SRR5643662five period of Gastrodia elata20.990
SRR5643663five period of Gastrodia elata23.730
SRR5643664five period of Gastrodia elata21.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.520
SRR6049655Rhizomagastrodiae_C368-T10_good_114.000
SRR6049656Rhizomagastrodiae_C368-T07_good_120.600
SRR6049657Rhizomagastrodiae_C368-T07_good_117.410
SRR6049658Rhizomagastrodiae_C368-T04_good_118.740
SRR6049659Rhizomagastrodiae_C368-T04_good_119.630
SRR6049660Rhizomagastrodiae_C368-T01_good_119.180
SRR6049661Rhizomagastrodiae_C368-T04_good_119.340
SRR6049662Rhizomagastrodiae_C368-T01_good_125.070
SRR6049663Rhizomagastrodiae_C368-T01_good_121.980
SRR6049664Rhizomagastrodiae_C368-T10_good_121.060
SRR6049665Rhizomagastrodiae_C368-T10_good_121.060
SRP279888GastroGastrodia elata tuber 20.12
JuvenJuvenile tuber16.02
Mother_GastroMother tuber of Gastrodia elata 13.64
Mother_JuvenMother tuber of Juvenile 13.29