Gene detail

Detail information of GWHGAAEX014869/evm.TU.scaffold_63.42

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428224827\|ref\|YP_007108924.1\|	4.00E-132	ABC-1 domain-containing protein [Geitlerinema sp. PCC 7407]
KOG	KOG1235	0	Predicted unusual protein kinase
nr	gi\|743766922\|ref\|XP_010913707.1\|	0	PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9MA15\|Y1796_ARATH	3.00E-111	Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic (Precursor)
trEMBL	tr\|M0S2G1\|M0S2G1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P23540_001}
TAIR	AT5G24970	0	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	882838	975327	+

Transcript Sequence
>GWHTAAEX014869 TATTGACATTCTTCACGGCAGTTCAGATTTCAAGACCGCGCACTCCATTCTCATCCACTAACGCAATACCACTCTCATTTTTACCCTTATACTCTCTCCTTCCCCTGCTTCCCTTTCTTCCAGCAGCTCGGTCTTTCCTTTCCCTCCTACCCCCTTCCGATTCCCCAATATCTCATGATATCCACGCGTGCAGGCACTAAAACCCTAGTCCATGAGAAATGCGCTTGCCGCAATCCTTTATCGATGCCGAAGCCATCGCATTTCTCAAGGCTCGTCCATCGGCAATGGTAACCTCTCTTGGAAAATTGCAGTGGCCATTAGGCTCTTCGAAAGCAACAATGGATCTCCGCAGTTTTTCCGCAGCTTCTCGACAGTATTTACTAGTGTTCATGGTGGGAAGCCATCGTCTGAATATGCTAGGCTGCGGAAGCTTTCGCTGGAGACTGAGTTTGGGCACATGCTGGGAAAGCACGGGTCCAAGACGCTGTTTGCTTACTCGCGCTTTGGCCCATTCTTGGCCTTGTACAGGGCTGCCATTATATCGTTCCAGGTGGCTAAGCTAACTGTTTGGCATTTTTTTGTTCAAGACATCCATAAACGGGCTGTGAAGTTTCGGGAGACCTTAATCAGCTTGGGACCTTTCTATACTAAGCTTGGACAAGCGCTGAGCATACGGCCTGATATATTGCCTAAGATATATTGCCAAGAGCTGTCAAAACTACAGGATCAAATACCTCCATTTTCTTCTCATGTTGCTTTCAAATCAATAGAGTCTCAACTGGGAGCTCCAGTTTTTCATATATTCTCTGATATAAGTTCTGAACCCATTGCTGCTGCATCTTTGGGGCAAGTTTATAAAGCTCATTTACATTCTGGGGAGCTTGTAGCTGTTAAAGTTCAAAGACCTGGTATGGCACTTATGCTAACCCTTGATGCACTATTGTTTCATATGATTGGGGGGCAGTTGAAGCGCTTTTCCAAGGCTAGGAAGGACTTACTGGTTGCTGTTAATGAGATGGTAAGGCACATGTTTGAAGAAATTGATTATATTCTTGAGGCTCAAAATGCTGAAAAGTTTGCTTCTCTATATGCTCTTCCCCCAAAGCTATCGGACAATGCCATCCATGGCAGTACTTCACAAGGAGCGACTGAAAGGAGCTTACCTGTACATATTTTTAATTTTTTTGCTTATTTTCAAGGAACTGGTGACAGCAAGCAAATAAAGGTAACATCCATTAAAGTTCCCAAGATTTATTGGAACTACACTCGTAAGGCTGTGCTCACAATGGAGTGGGTAGATGGGATTAAGCTCACAGATTCTGATCGAATTTCCAAAGCTCATCTGAATAGGAAACTTTTAATCGATCAGGGACTTAGTTGCTCTTTGAGACAGTTACTCGAGGATGGTTTTTTTCATGCTGATCCACACCCAGGAAATCTTGTGGCTACTAACGATGGGTCTCTTGCATACTTTGACTTTGGTATGATGGGAGATATTCCCCAACATTACCGTGTAGGACTTATCAAAGTGCTTGTGCACTTTGTTAATCGAGACTCTTTGGGCTTAGCAAATGACTTTCTTTCTTTGGGATTTATTCCTGATGAAGTGGATACACACTTAGTTGCAGACGCTTTACATGCATCCTTTAACAGCGATAGAAGACTTTCAAATGATTTTCAGGGAGTAATGAGCCAATTGTATGACATCATGTATGAATTCAACTTCTCACTTCCTCCTGATTATGCTCTGGTTATTAGAGCACTGGGTTCTTTGGAAGGTACTGCCAAAGCTTTGGATCCGGATTTTAAAGTTATTGAGAGCGCATATCCGTTTGTGATTGGAAGACTACTCACAGATCCTGATCCTGACATGAGAAAAATTTTGAGGGAGCTTCTTATTCATAATGATGGTTCAATTAGATGGAACAGGCTTGAACGTTTGATTGCAGCTATTTCGGAGTTGTCTTACGAGAAAGCAAAAATATATGTTGATTCGGCTGCATACATTGATGGATGGAAATCCTTCGACATGAACGCCATTGTTTCCGCAACAGAGGATCTCTTATGCTTCATCTTATCAGCGAGAGGCCGAAGGGTTCGTGTTTTCCTCCTGCGAGACATTATTCAAACTGCAGACGCCTTTCTTCTTCAGAACGAGAATTTGACTTGTGGAGATGCCAAAGCAACCAAATCCAGTCAGGAGAGGCTGGGTCTGATAACTCGGGTGTGGCTTGGACTGAGATCGTTCGGGCAGGTGGTGCTTTTGGCGCCGCAGCTGTGGGCAGAACTGTTTGGCAGAATGCTGCTGAAAAGCGAGCTTCATGGATTTCTTCTCGACGTATTGACAGCGGTTTCAGGGCGACTCAAGAGTGGGCTGCCTGAAGCATTCTGGCTTTGTATTTCCAGATTATTCCATTATTTAGAGGAGCAGAATATTTTTTTCAAAAGAAAAATTTGCAGTGATTAAAGGATTTGTGGAGTAGGCTGCAGTACCGCATTTATTCCTTCAAAAATTTTTATAAAAAGTTATTGCAAGCTTAAAATGAATATTGTTATCTGCAGTTCCCTCCTGCTTTTTTGATGTTTCTCATGTTTTTTTTGGGAGGAATTGAAGTATTTTTGAAGTATGCATCTTTCATTAAAGAAATTATAGAAG

Network for GWHGAAEX014869

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03109.15	ABC1	189	294	2.50E-28

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.320
SRP064423	SRR2545915	Juvenile tuber	4.310
SRP108465	SRR5643513	five period of Gastrodia elata	3.680
	SRR5643514	five period of Gastrodia elata	5.190
	SRR5643515	five period of Gastrodia elata	3.680
	SRR5643524	five period of Gastrodia elata	3.780
	SRR5643525	five period of Gastrodia elata	1.780
	SRR5643528	five period of Gastrodia elata	1.280
	SRR5643658	five period of Gastrodia elata	1.090
	SRR5643659	five period of Gastrodia elata	3.840
	SRR5643660	five period of Gastrodia elata	3.560
	SRR5643661	five period of Gastrodia elata	3.840
	SRR5643662	five period of Gastrodia elata	3.830
	SRR5643663	five period of Gastrodia elata	3.900
	SRR5643664	five period of Gastrodia elata	3.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.660
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.740
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.910
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.320
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.790
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.660
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.660
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.980
SRP279888	Gastro	Gastrodia elata tuber	4.62
	Juven	Juvenile tuber	3.29
	Mother_Gastro	Mother tuber of Gastrodia elata	3.97
	Mother_Juven	Mother tuber of Juvenile	3.13