Gene detail

Detail information of GWHGAAEX014881/evm.TU.scaffold_63.55

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|126700906\|ref\|YP_001089803.1\|	1.00E-125	oxidoreductase [Clostridium difficile 630]
nr	gi\|743879239\|ref\|XP_010908364.1\|	0	PREDICTED: uncharacterized protein LOC105034784 isoform X1 [Elaeis guineensis]
trEMBL	tr\|I1HJF9\|I1HJF9_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI2G25410.1}
TAIR	AT4G30720	0	FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	1152359	1173424	-

Transcript Sequence
>GWHTAAEX014881 ATGGCGGCTAACTTCCAGCCTCTGACATTCTGCTCGTCTTACTCGATTTCTAGTCAAAGATCCCATTTCTACACGACAGCCTCTTACTTTCCGAGCACTGACCGGCATGTTGCTCTCATAACGATTTCCAAAACAATCCCATGCCATTCTATTCTGCGCGCCAAACGAACGGGGAAGCGTAGGTACCCTTCCGAGAATAAAAGGCTCGAAAGGATGACTAAAACTATAATCCAGACAGAAATCAAGAACAAGGAGGAGGGATTTTGGAGATTCTCTAAGCTCGCCGTCCCTGTTCACAAGGATCCTGGCAAGGAATTTATTGGCGTCTCCGTACCTCTTCTCGAATCAATCGCCAAAGTAATAGAGTTTCCGGTGGCCAATATGCTGCCAATGGAAGCTTTCACAGTTGTTCGAAAGTCCTTTGATGCGAGGAAGTTTTTAAAGGATCCCCAGTTTGTTTATACCGTAGACATGGATGTCAAGAAACTTCTGAATCTGGAGCCTCATGCATGGGATTATATTTTGCGATTGAAGCCAAAACTTGGATATACAGAATATATGCCAGCCAGAGATGTTCCTCCTGATTTGATCAGCATTTTACAAAAACTTGGAAACAGCCAACATTGCACTAAACTGGATGAAGAAAGGGATGGCAGCATCATTAACTCTTTGTCCTGTTCCTTGGTCTCTAGCAGACCAAGAGTTGCGGTTGTGGGAAGTGGACCATCTGGCTTATTTGCTTCTCTAGTTCTTGGTGAGCTGGGAGCAAATGTTACTTTAATAGAAAGGGGCGAGGCTGTTGAGCAAAGAGGGCGTGATATTGGTGCCTTGGTAGTTCGAAGAGCTCTACAATCTGAAAGTAATTTCTGCTTTGGTGAGGGTGGTGCAGGTACATGGAGTGATGGAAAGTTGGTAACCCGAATAGGAAGGAACAGTGATAGCGTTCACGCCATCATGAAGACACTGGTTCAATTTGGAGCGCCACCGGAGATTCTTCTTGATGGAAAACCTCATCTCGGAACAGACCGTTTGATTAGAATTCTCAGGAACTTTCGTCAGCATTTAGTTAGATTGGGCGTTGACATCAAGTTTGGAACAAGACTGGATGACCTTATTGTGGAAAACAAACAAATTATTGGAATTAAGGTCTCTGATTCAAGAGTTGAGGACAAATCTACCCAGAGTTTATTATTTGATGCGGTTGTTTTAGCAGTTGGGCATTCAGCTCGAGATGTATATCAAATGCTTCTTCAGCATAATGTGGACATAGTCCCCAAGGACTTTGCTGTTGGCTTACGAATTGAGCATCCACAGGAACTAATAAACAAGATACAGTACTCTTCATTTTCTCCTGAGGTTCAATTTGGTCGTGGCAAGATACCTGTTGCAGATTACAAAGTCGTTCAGTATGTCACCAAAGGAGATGAGAATTTGAACTCATGTTCAGAGGATAGCTCTAGAAGCTGTTACTCTTTTTGCATGTGCCCTGGGGGACAGGTTGTTCTAACTAGCACAAAATTTTCTGAGATCTCTATCAATGGAATGTCATTTTCACGCCGTTCATCAAGATGGGCCAATGCTGCCATTGTTGTTACTGTCTCAGCAAATGATTTTACGTCCTTCAGGGATCATGGGCCTCTTTGTGGAGTTGAATTTCAGAAACACTACGAAAGAAAGGCAGCTATGATGGGAGGAGGAAACTTTGTTGTTCCTGCACAGGCAGTTACTGATTTTCTTGATAATAAATTATCTGTGACTTCTCTTCCACAATCAAGCTACCGATTAGGAGTTAAACCCTCAAATCTTCATGAACTACTTCCAGCTCACATAACTAATGCCTTGCAACAGTCATTAGTAGCTTTTGATAGAAAGCTTCCTGGATATATTTCCAAAGATGCACTACTTCATGGTGTTGAGACAAGGACGAGCTCCCCCGTTCAAATTCTTCGCGACCCAGAAAGCCACGAGAGTACTTCTCTGAGAGGATTGTACCCTGCCGGAGAAGGCGCCGGTCATGCCGGCGGGATTGTCAGTGCTGCCGTCGACGGCGTTCACTGCGGCTTCGCCCTCGCTAAAAGTCTGAACCTGTTCGATGGAGATGTCAAGGTTGTATTGGGCAATGCTCAGAGAGAGTCGACTTTTTGA

Network for GWHGAAEX014881

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01494.18	FAD_binding_3	234	272	2.80E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071949	Molecular Function	FAD binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.630
SRP064423	SRR2545915	Juvenile tuber	6.350
SRP108465	SRR5643513	five period of Gastrodia elata	5.570
	SRR5643514	five period of Gastrodia elata	5.300
	SRR5643515	five period of Gastrodia elata	4.310
	SRR5643524	five period of Gastrodia elata	5.170
	SRR5643525	five period of Gastrodia elata	4.250
	SRR5643528	five period of Gastrodia elata	5.100
	SRR5643658	five period of Gastrodia elata	2.600
	SRR5643659	five period of Gastrodia elata	4.270
	SRR5643660	five period of Gastrodia elata	5.250
	SRR5643661	five period of Gastrodia elata	5.620
	SRR5643662	five period of Gastrodia elata	4.760
	SRR5643663	five period of Gastrodia elata	4.590
	SRR5643664	five period of Gastrodia elata	4.090
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.230
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.400
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.040
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.840
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.090
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.240
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.440
SRP279888	Gastro	Gastrodia elata tuber	5.15
	Juven	Juvenile tuber	6.82
	Mother_Gastro	Mother tuber of Gastrodia elata	7.08
	Mother_Juven	Mother tuber of Juvenile	7.21