Detail information of GWHGAAEX014882/evm.TU.scaffold_63.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262194905|ref|YP_003266114.1|4.00E-32actin/actin family protein [Haliangium ochraceum DSM 14365]
KOGKOG06760Actin and related proteins
nrgi|743762136|ref|XP_010906644.1|0PREDICTED: actin-related protein 7 isoform X1 [Elaeis guineensis]
Swissprottr|Q8L4Y5|ARP7_ARATH0Actin-related protein 7
trEMBLtr|D7T325|D7T325_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI24906.3}
TAIRAT3G608300actin-related protein 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006211784771196469+
Transcript Sequence

Network for GWHGAAEX014882

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00022.18Actin21839.40E-38
PF00022.18Actin1923619.50E-36
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.860
SRR2545915Juvenile tuber21.430
SRP108465SRR5643513five period of Gastrodia elata18.370
SRR5643514five period of Gastrodia elata16.390
SRR5643515five period of Gastrodia elata15.670
SRR5643524five period of Gastrodia elata14.900
SRR5643525five period of Gastrodia elata19.050
SRR5643528five period of Gastrodia elata15.750
SRR5643658five period of Gastrodia elata16.670
SRR5643659five period of Gastrodia elata20.940
SRR5643660five period of Gastrodia elata23.800
SRR5643661five period of Gastrodia elata21.250
SRR5643662five period of Gastrodia elata18.010
SRR5643663five period of Gastrodia elata17.690
SRR5643664five period of Gastrodia elata16.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.680
SRR6049655Rhizomagastrodiae_C368-T10_good_115.320
SRR6049656Rhizomagastrodiae_C368-T07_good_116.450
SRR6049657Rhizomagastrodiae_C368-T07_good_114.430
SRR6049658Rhizomagastrodiae_C368-T04_good_112.590
SRR6049659Rhizomagastrodiae_C368-T04_good_112.560
SRR6049660Rhizomagastrodiae_C368-T01_good_114.260
SRR6049661Rhizomagastrodiae_C368-T04_good_115.860
SRR6049662Rhizomagastrodiae_C368-T01_good_118.480
SRR6049663Rhizomagastrodiae_C368-T01_good_116.380
SRR6049664Rhizomagastrodiae_C368-T10_good_118.330
SRR6049665Rhizomagastrodiae_C368-T10_good_118.330
SRP279888GastroGastrodia elata tuber 17.12
JuvenJuvenile tuber13.34
Mother_GastroMother tuber of Gastrodia elata 11.74
Mother_JuvenMother tuber of Juvenile 7.89