Detail information of GWHGAAEX014886/evm.TU.scaffold_63.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33051.00E-55Uncharacterized conserved protein
nrgi|672117242|ref|XP_008781800.1|1.10E-62PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Phoenix dactylifera]
trEMBLtr|K4DHB2|K4DHB2_SOLLC5.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc12g096390.1.1}
TAIRAT5G107001.00E-55Peptidyl-tRNA hydrolase II (PTH2) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006212264421229449+
Transcript Sequence

Network for GWHGAAEX014886

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01981.15PTH2611727.80E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004045Molecular Functionaminoacyl-tRNA hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.470
SRR2545915Juvenile tuber17.730
SRP108465SRR5643513five period of Gastrodia elata23.360
SRR5643514five period of Gastrodia elata21.020
SRR5643515five period of Gastrodia elata24.020
SRR5643524five period of Gastrodia elata23.420
SRR5643525five period of Gastrodia elata33.790
SRR5643528five period of Gastrodia elata25.560
SRR5643658five period of Gastrodia elata18.050
SRR5643659five period of Gastrodia elata28.920
SRR5643660five period of Gastrodia elata27.850
SRR5643661five period of Gastrodia elata28.580
SRR5643662five period of Gastrodia elata25.990
SRR5643663five period of Gastrodia elata25.400
SRR5643664five period of Gastrodia elata25.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.980
SRR6049655Rhizomagastrodiae_C368-T10_good_138.970
SRR6049656Rhizomagastrodiae_C368-T07_good_123.250
SRR6049657Rhizomagastrodiae_C368-T07_good_117.120
SRR6049658Rhizomagastrodiae_C368-T04_good_115.650
SRR6049659Rhizomagastrodiae_C368-T04_good_119.310
SRR6049660Rhizomagastrodiae_C368-T01_good_119.470
SRR6049661Rhizomagastrodiae_C368-T04_good_117.700
SRR6049662Rhizomagastrodiae_C368-T01_good_127.010
SRR6049663Rhizomagastrodiae_C368-T01_good_117.750
SRR6049664Rhizomagastrodiae_C368-T10_good_129.180
SRR6049665Rhizomagastrodiae_C368-T10_good_129.180
SRP279888GastroGastrodia elata tuber 43.05
JuvenJuvenile tuber30.63
Mother_GastroMother tuber of Gastrodia elata 36.55
Mother_JuvenMother tuber of Juvenile 26.57