Gene detail

Detail information of GWHGAAEX014888/evm.TU.scaffold_63.64

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|720095141\|ref\|XP_010246582.1\|	3.53E-146	PREDICTED: uncharacterized protein LOC104589845 [Nelumbo nucifera]
trEMBL	tr\|F6HBY4\|F6HBY4_VITVI	3.00E-146	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49717.1}
TAIR	AT1G16080	3.00E-144	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	1286916	1289034	+

Transcript Sequence
>GWHTAAEX014888 ATATTTAGGAACAATTAGAATTTTAATTCTTCCCCTGCAATGGCAACCAGAGCTGCCATCACGGCGGCGATTATAGTCGGCGGCGGGAGGGTCGGCAAGGTTCTTCAGTCCATGGGAGACGGCCGTGATGTCCTCGTCTGCCGCGGTCAGCGCGTGCCCGTTGATTTTGACGGTCCGATTTTCGTCTGCACCCGAAACGACGACCTAGACGCCGTTCTCGAGGCCACTCCTTCCTCTCGATGGAGCGATTTGGTCTTTTTCCAGAATGGATTGCTTGATCCATGGATCGAGAGCAGAGGGCTTCGAGATGTGAGCCAAGTTCTGGCGTATTTTGCTGTGCCCGAGCTTGGGGAGCCTCCAGTGGATGGAAAGACTGAGACGAATCCTGAAGGGCTGACCGCCGCATATGGGAAATGGGCTTCTGCGGCTGCAGCGCGTTTGCACAATGGTGGTCTCTCCTGCAAGATTTTAGAAAAGGAAACTTTCCAAATGCAAATGTTTGAGAAATTGATATGGATTTCAGCATTCATGCTCGTTGGAGTGCGCCACTCTGGAGCTACAGTTGGTGTTGTGGAGAAAGATTATCATTATGAGGTCACAAGCCTCATCTTAGAGCTGGGATCTGCTGCTGCTGCAGAGAAGGCATTAACATTTGAGAAAGGAATGGTGGAGAGGCTATGCGCTTACTCGAGGGCTGTTGCGCATTTTCCCACTGCTGTGAAAGAGTTTAAGTGGAGAAACGGCTGGTTTTACTCACTGTCTGTAACGGCACTTGCTCTGGGAAAAGATGATCCTTGCTCGCTCCATACAACTTGGCTTAAAGATATGAAGATCATATGAGAATTATCTGGTATGCACTTTGAGTTCACTGTTCATCATATGAGAATTATATAAATTACTACTAAGTTGGGGTTTCTGTCAACTTGGGAACTGACTCATGTATGTTGCTTGTCCATCTTGAATAAAATTTATAGTTTTTCAGGATAATTACATGAAATATAAGCTTGTTGATCACTTATTATCACTTCCGGGATAATAAAATACATATACTAGAACCTAAAGAGTGTAACAAATTAGTCTAAGTGATATGTGCAAGATCTTACCTTGACATGGCAATTTTGGAGAACTTTGGGAAAGATGAAGACTTCTTGCACAGAACTTCAATCCTAAGAGCACAAACAACACTACAATCATCGCTATCACCTCTTTACTATCCAATAGCTTAGAGGAAGGCATATGTGGGAGTTTGAAGGGGGAGGAGGTGCTTGGGGAGAAAAAAGAAATTAGGGATTAGAGGGAGAGAGCTCTATGGTGAAAAGCTCTTCCCAGGCTTTCGTTGAGGTATGAATAGGTCCCTAGATGATTTTGGGCTAATGGATTGATTAGTTAAGGCCTAGATCAAAATTTCAATCCTAAGTTTATTCATTCCTTGTTGTTCAATAACACGCACAAACACATTAAATGGAGTTCAAACTAAAAAATTCAAAAACATCACTCAAGGAACTGAAACATCACATTACAAATTCTTCTACATTTCCTTTTTTTTATTGATTTTAGGAGATGCAGTTTAGGCACTACTGCAATAATATTTTTTGGTTAGAATGGAGAATCACTTGGAAGTTGCAAAATTGATCAAAGCCATCAAATTTTCATAGGAGGACCCTCCCTTGTGCACTGCTCTGCTTGCCTTCTCCCTCAACTCCTTTGCCCTCTTCCTCATCCCTTCCCCTTCTTCTCCCCCACCCATCAATCTCCTGACCGCCGCCTCCACCTCCTCCTTCCCCATC

Network for GWHGAAEX014888

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.770
SRP064423	SRR2545915	Juvenile tuber	5.880
SRP108465	SRR5643513	five period of Gastrodia elata	4.630
	SRR5643514	five period of Gastrodia elata	5.760
	SRR5643515	five period of Gastrodia elata	5.080
	SRR5643524	five period of Gastrodia elata	5.940
	SRR5643525	five period of Gastrodia elata	4.590
	SRR5643528	five period of Gastrodia elata	3.360
	SRR5643658	five period of Gastrodia elata	4.490
	SRR5643659	five period of Gastrodia elata	8.550
	SRR5643660	five period of Gastrodia elata	7.450
	SRR5643661	five period of Gastrodia elata	8.360
	SRR5643662	five period of Gastrodia elata	6.450
	SRR5643663	five period of Gastrodia elata	5.840
	SRR5643664	five period of Gastrodia elata	5.850
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.160
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.200
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.480
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.730
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.520
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.960
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.050
SRP279888	Gastro	Gastrodia elata tuber	7.80
	Juven	Juvenile tuber	3.42
	Mother_Gastro	Mother tuber of Gastrodia elata	3.70
	Mother_Juven	Mother tuber of Juvenile	2.66