Detail information of GWHGAAEX014901/evm.TU.scaffold_63.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|9.00E-34small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00701.00E-79GTP-binding ADP-ribosylation factor Arf1
nrgi|590580596|ref|XP_007014113.1|3.08E-124ADP-ribosylation factor 3 isoform 1 [Theobroma cacao]
Swissprottr|P40940|ARF3_ARATH6.00E-124ADP-ribosylation factor 3
trEMBLtr|A0A061GRG1|A0A061GRG1_THECC1.00E-124ADP-ribosylation factor 3 isoform 1 {ECO:0000313|EMBL:EOY31732.1}
TAIRAT1G106301.00E-79ADP-ribosylation factor A1F

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006216960211728648+
Transcript Sequence

Network for GWHGAAEX014901

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf51761.60E-75
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.030
SRR2545915Juvenile tuber24.830
SRP108465SRR5643513five period of Gastrodia elata29.810
SRR5643514five period of Gastrodia elata32.040
SRR5643515five period of Gastrodia elata29.970
SRR5643524five period of Gastrodia elata33.840
SRR5643525five period of Gastrodia elata40.550
SRR5643528five period of Gastrodia elata36.280
SRR5643658five period of Gastrodia elata35.930
SRR5643659five period of Gastrodia elata27.380
SRR5643660five period of Gastrodia elata25.910
SRR5643661five period of Gastrodia elata29.330
SRR5643662five period of Gastrodia elata26.310
SRR5643663five period of Gastrodia elata26.020
SRR5643664five period of Gastrodia elata24.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.900
SRR6049655Rhizomagastrodiae_C368-T10_good_123.390
SRR6049656Rhizomagastrodiae_C368-T07_good_120.180
SRR6049657Rhizomagastrodiae_C368-T07_good_114.670
SRR6049658Rhizomagastrodiae_C368-T04_good_119.970
SRR6049659Rhizomagastrodiae_C368-T04_good_119.410
SRR6049660Rhizomagastrodiae_C368-T01_good_117.870
SRR6049661Rhizomagastrodiae_C368-T04_good_118.420
SRR6049662Rhizomagastrodiae_C368-T01_good_123.480
SRR6049663Rhizomagastrodiae_C368-T01_good_122.000
SRR6049664Rhizomagastrodiae_C368-T10_good_125.000
SRR6049665Rhizomagastrodiae_C368-T10_good_125.000
SRP279888GastroGastrodia elata tuber 27.00
JuvenJuvenile tuber19.13
Mother_GastroMother tuber of Gastrodia elata 36.89
Mother_JuvenMother tuber of Juvenile 24.61