Detail information of GWHGAAEX014902/evm.TU.scaffold_63.80
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|379012008|ref|YP_005269820.1| | 3.00E-21 | serine/threonine-protein kinase PrkC [Acetobacterium woodii DSM 1030] |
| KOG | KOG1187 | 1.00E-110 | Serine/threonine protein kinase |
| nr | gi|747047787|ref|XP_011069876.1| | 0 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Sesamum indicum] |
| Swissprot | tr|Q9LSC2|Y3589_ARATH | 9.00E-109 | PTI1-like tyrosine-protein kinase At3g15890 |
| trEMBL | tr|K4CBD2|K4CBD2_SOLLC | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc07g006610.2.1} |
| TAIR | AT1G52540 | 1.00E-110 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000062 | 1731259 | 1733566 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014902
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 44 | 311 | 3.80E-41 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.110 |
| SRR2545915 | Juvenile tuber | 9.890 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 49.800 |
| SRR5643514 | five period of Gastrodia elata | 41.640 | |
| SRR5643515 | five period of Gastrodia elata | 24.790 | |
| SRR5643524 | five period of Gastrodia elata | 30.830 | |
| SRR5643525 | five period of Gastrodia elata | 5.810 | |
| SRR5643528 | five period of Gastrodia elata | 5.070 | |
| SRR5643658 | five period of Gastrodia elata | 6.490 | |
| SRR5643659 | five period of Gastrodia elata | 11.940 | |
| SRR5643660 | five period of Gastrodia elata | 25.300 | |
| SRR5643661 | five period of Gastrodia elata | 16.730 | |
| SRR5643662 | five period of Gastrodia elata | 17.110 | |
| SRR5643663 | five period of Gastrodia elata | 17.860 | |
| SRR5643664 | five period of Gastrodia elata | 25.570 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 45.050 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 60.280 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 49.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 37.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 65.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 75.220 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 35.610 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 44.670 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 53.650 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 44.740 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 73.540 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 73.540 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 39.85 |
| Juven | Juvenile tuber | 48.80 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.89 | |
| Mother_Juven | Mother tuber of Juvenile | 33.15 |