Detail information of GWHGAAEX014907/evm.TU.scaffold_63.85


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|292491238|ref|YP_003526677.1|6.00E-08RecX family transcriptional regulator [Nitrosococcus halophilus Nc 4]
nrgi|672185116|ref|XP_008812734.1|2.96E-65PREDICTED: uncharacterized protein LOC103723559 [Phoenix dactylifera]
trEMBLtr|I1J349|I1J349_BRADI6.00E-57Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI5G25467.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006218692131880468-
Transcript Sequence

Network for GWHGAAEX014907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02631.15RecX3014393.30E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006282Biological Processregulation of DNA repair

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.880
SRR2545915Juvenile tuber7.020
SRP108465SRR5643513five period of Gastrodia elata16.100
SRR5643514five period of Gastrodia elata13.480
SRR5643515five period of Gastrodia elata11.160
SRR5643524five period of Gastrodia elata7.910
SRR5643525five period of Gastrodia elata3.710
SRR5643528five period of Gastrodia elata2.970
SRR5643658five period of Gastrodia elata3.440
SRR5643659five period of Gastrodia elata7.540
SRR5643660five period of Gastrodia elata6.790
SRR5643661five period of Gastrodia elata7.120
SRR5643662five period of Gastrodia elata4.640
SRR5643663five period of Gastrodia elata4.730
SRR5643664five period of Gastrodia elata5.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.170
SRR6049655Rhizomagastrodiae_C368-T10_good_16.650
SRR6049656Rhizomagastrodiae_C368-T07_good_18.070
SRR6049657Rhizomagastrodiae_C368-T07_good_16.770
SRR6049658Rhizomagastrodiae_C368-T04_good_110.880
SRR6049659Rhizomagastrodiae_C368-T04_good_17.890
SRR6049660Rhizomagastrodiae_C368-T01_good_110.330
SRR6049661Rhizomagastrodiae_C368-T04_good_110.360
SRR6049662Rhizomagastrodiae_C368-T01_good_112.490
SRR6049663Rhizomagastrodiae_C368-T01_good_112.790
SRR6049664Rhizomagastrodiae_C368-T10_good_18.360
SRR6049665Rhizomagastrodiae_C368-T10_good_18.360
SRP279888GastroGastrodia elata tuber 9.16
JuvenJuvenile tuber3.54
Mother_GastroMother tuber of Gastrodia elata 2.40
Mother_JuvenMother tuber of Juvenile 2.47