Detail information of GWHGAAEX014913/evm.TU.scaffold_63.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|161511148|ref|NP_539741.2|1.00E-71elongation factor Ts [Brucella melitensis bv. 1 str. 16M]
KOGKOG10712.00E-135Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt
nrgi|672141718|ref|XP_008794695.1|1.74E-178PREDICTED: elongation factor Ts, mitochondrial-like isoform X2 [Phoenix dactylifera]
Swissprottr|Q6ZJS7|EFTS_ORYSJ9.00E-169Elongation factor Ts, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03135} (Precursor)
trEMBLtr|M0SME9|M0SME9_MUSAM9.00E-172Elongation factor Ts, mitochondrial {ECO:0000256|HAMAP-Rule:MF_03135}
TAIRAT4G111202.00E-135translation elongation factor Ts (EF-Ts), putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006219032791932394-
Transcript Sequence

Network for GWHGAAEX014913

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00889.18EF_TS1183571.60E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006414Biological Processtranslational elongation
GO:0003746Molecular Functiontranslation elongation factor activity
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.780
SRR2545915Juvenile tuber61.840
SRP108465SRR5643513five period of Gastrodia elata27.390
SRR5643514five period of Gastrodia elata27.630
SRR5643515five period of Gastrodia elata24.830
SRR5643524five period of Gastrodia elata27.960
SRR5643525five period of Gastrodia elata31.300
SRR5643528five period of Gastrodia elata37.650
SRR5643658five period of Gastrodia elata39.660
SRR5643659five period of Gastrodia elata28.250
SRR5643660five period of Gastrodia elata27.500
SRR5643661five period of Gastrodia elata27.440
SRR5643662five period of Gastrodia elata33.340
SRR5643663five period of Gastrodia elata32.420
SRR5643664five period of Gastrodia elata30.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.750
SRR6049655Rhizomagastrodiae_C368-T10_good_121.250
SRR6049656Rhizomagastrodiae_C368-T07_good_123.360
SRR6049657Rhizomagastrodiae_C368-T07_good_129.540
SRR6049658Rhizomagastrodiae_C368-T04_good_119.310
SRR6049659Rhizomagastrodiae_C368-T04_good_120.620
SRR6049660Rhizomagastrodiae_C368-T01_good_123.390
SRR6049661Rhizomagastrodiae_C368-T04_good_121.740
SRR6049662Rhizomagastrodiae_C368-T01_good_121.740
SRR6049663Rhizomagastrodiae_C368-T01_good_115.650
SRR6049664Rhizomagastrodiae_C368-T10_good_127.780
SRR6049665Rhizomagastrodiae_C368-T10_good_127.780
SRP279888GastroGastrodia elata tuber 39.19
JuvenJuvenile tuber53.08
Mother_GastroMother tuber of Gastrodia elata 23.75
Mother_JuvenMother tuber of Juvenile 34.94