Detail information of GWHGAAEX014919/evm.TU.scaffold_63.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|209963756|ref|YP_002296671.1|2.00E-24hypothetical protein RC1_0419 [Rhodospirillum centenum SW]
KOGKOG30154.00E-107F1-ATP synthase assembly protein
nrgi|695064808|ref|XP_009420972.1|1.22E-126PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RHN7|M0RHN7_MUSAM5.00E-127Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P12610_001}
TAIRAT5G406604.00E-107ATP12 protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006220417082062177+
Transcript Sequence

Network for GWHGAAEX014919

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07542.10ATP12731984.70E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043461Biological Processproton-transporting ATP synthase complex assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.740
SRR2545915Juvenile tuber14.100
SRP108465SRR5643513five period of Gastrodia elata31.110
SRR5643514five period of Gastrodia elata34.360
SRR5643515five period of Gastrodia elata31.290
SRR5643524five period of Gastrodia elata33.760
SRR5643525five period of Gastrodia elata29.770
SRR5643528five period of Gastrodia elata33.780
SRR5643658five period of Gastrodia elata24.010
SRR5643659five period of Gastrodia elata20.570
SRR5643660five period of Gastrodia elata23.630
SRR5643661five period of Gastrodia elata21.400
SRR5643662five period of Gastrodia elata20.780
SRR5643663five period of Gastrodia elata22.270
SRR5643664five period of Gastrodia elata19.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.730
SRR6049655Rhizomagastrodiae_C368-T10_good_153.870
SRR6049656Rhizomagastrodiae_C368-T07_good_140.030
SRR6049657Rhizomagastrodiae_C368-T07_good_128.900
SRR6049658Rhizomagastrodiae_C368-T04_good_135.070
SRR6049659Rhizomagastrodiae_C368-T04_good_128.030
SRR6049660Rhizomagastrodiae_C368-T01_good_134.540
SRR6049661Rhizomagastrodiae_C368-T04_good_130.990
SRR6049662Rhizomagastrodiae_C368-T01_good_151.360
SRR6049663Rhizomagastrodiae_C368-T01_good_139.230
SRR6049664Rhizomagastrodiae_C368-T10_good_154.490
SRR6049665Rhizomagastrodiae_C368-T10_good_154.490
SRP279888GastroGastrodia elata tuber 33.69
JuvenJuvenile tuber31.31
Mother_GastroMother tuber of Gastrodia elata 26.97
Mother_JuvenMother tuber of Juvenile 24.06