Detail information of GWHGAAEX014921/evm.TU.scaffold_63.100
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|479131778|ref|YP_005071738.1| | 6.00E-130 | cell division protein FtsZ [Arthrospira platensis NIES-39] |
| nr | gi|743767409|ref|XP_010913967.1| | 0 | PREDICTED: cell division protein FtsZ homolog 1, chloroplastic-like [Elaeis guineensis] |
| Swissprot | tr|Q42545|FTSZ1_ARATH | 0 | Cell division protein FtsZ homolog 1, chloroplastic (Precursor) |
| trEMBL | tr|W1P236|W1P236_AMBTC | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERN01669.1} |
| TAIR | AT5G55280 | 0 | homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000062 | 2070089 | 2084738 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014921
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00091.24 | Tubulin | 68 | 228 | 1.10E-41 |
| PF12327.7 | FtsZ_C | 277 | 370 | 2.80E-30 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03531 | ftsZ | Cell cycle - Caulobacter | map04112 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007017 | Biological Process | microtubule-based process |
| GO:0005525 | Molecular Function | GTP binding |
| GO:0003924 | Molecular Function | GTPase activity |
| GO:0005874 | Cellular Component | microtubule |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.460 |
| SRR2545915 | Juvenile tuber | 13.840 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.630 |
| SRR5643514 | five period of Gastrodia elata | 29.610 | |
| SRR5643515 | five period of Gastrodia elata | 23.950 | |
| SRR5643524 | five period of Gastrodia elata | 23.710 | |
| SRR5643525 | five period of Gastrodia elata | 17.070 | |
| SRR5643528 | five period of Gastrodia elata | 10.080 | |
| SRR5643658 | five period of Gastrodia elata | 9.360 | |
| SRR5643659 | five period of Gastrodia elata | 30.650 | |
| SRR5643660 | five period of Gastrodia elata | 30.360 | |
| SRR5643661 | five period of Gastrodia elata | 30.870 | |
| SRR5643662 | five period of Gastrodia elata | 31.470 | |
| SRR5643663 | five period of Gastrodia elata | 30.840 | |
| SRR5643664 | five period of Gastrodia elata | 31.770 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.640 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 22.520 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.040 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.170 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 17.550 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.400 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 18.020 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.440 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.230 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.230 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.81 |
| Juven | Juvenile tuber | 16.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.46 | |
| Mother_Juven | Mother tuber of Juvenile | 12.84 |