Gene detail

Detail information of GWHGAAEX014923/evm.TU.scaffold_63.102

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2352	6.00E-110	Predicted spermine/spermidine synthase
nr	gi\|695033795\|ref\|XP_009404382.1\|	2.40E-132	PREDICTED: methyltransferase-like protein 13 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|F6I5V5\|F6I5V5_VITVI	9.00E-120	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB62323.1}
TAIR	AT5G04610	6.00E-110	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	2122500	2124780	+

Transcript Sequence
>GWHTAAEX014923 AAATATTATAAGAAATTATTTTAAGGGGCTGTTTGACATGAGTTAATTTGAAAATTATGAATGTAAAATAATTTGTTTACAATGAAATTTGATTGCTGTGTAATTATATTATTTTACTGTTGATCGGTAATTTATAGAAAATTTAATTTTCTTTTTCTTTGGCATGAAGTAATTTATGAGCATGATAACGGACGAATCTTTGAATGAACGGATCTTTCCTTTGGACTAACGAACCTCGTTAAATTCGTTCAAACGAATGATGGGTTCAACAGAATCATTCGCCGGAGAAGACAACCAACGAAATCAATCGTCGAATGCAAGAATTGTTAACATAAAATTGAATTACATTGAAAAAAAAAATATCATTATTACTTTACACCAAGCATCAAAAATTTACACATTTTACTTCATCCAAATTGGCTTTATAAAATTTTCATGAACGTCTAACCAAGAGAAATTAGGAAAGTTGGAGAATAGCAAGTAGCATAGTGACAGCAGAGCAATTGTTTTTTGTAAAAGAACTTTGCTTCGTCTCCTTCCTCTAACTCAATCCCGCCGTCATGGGGACAGGCGGCATGGATCCCGCAACCTTCGAACGCCTCTTCCCTTCTCGCTTCATCTCCTTCTCATTTCCGAACCCTCTCCCTTCTCCGGGAAACCCCTTCGCCGTTAATCTCCGTGTCGCCGTCGCAGATTCTCCGTCGATCGCCGGGAATTTTATTACGCCGACAATTGCCGCAGTTCTCGTACCTCTCCGCCGTGAAGATGATTGGATTTTTTCAACCGTCTCCGGCCATTTCCAGCTTCTCTTCTCCCTTTCCTCTCCCAACCATCGCATCTCCCGGCTCATCCTCATCGGCGACCCTCCGTCCTCATTCTCCTCTCTTCCGCAACCCTATCGTCGTCGTCCCCAAGCCAACGATGACGCAGAATCGCTGATCTCTTTCCAGGAGGGCCTCGCCCCTCTTCTCCTCGCCCTATGCCCTAAATCAGTTTTTTCAAGCGGCATTCCTTCGATCCCCTTTCTCTCGTACGAGGACGATGTCATTAGCTGCACTCCGGTTGCAAAACTTTTCGGACCCTTCGCCGGAGAGATGGTGGTGGAGGACGTTGAGATCGACCTATCGCCTGCGTCTCCGCCAGAACTCCGTCGCCGGTTGAGGTTCAAGAAGATGCCCAATCTCATTCAATCCCAGGTACGTCTCCTTTCCGAATTTTGTCCGGAAATGGGTTCGTTGGTTCAACCCTATCTTGGGCTTATGGTTTCCGCTCTTTTTCTGATTGCTCCTGCTATCGACGGGGCTTTCCGATCTGGCAATATGCCTCGGGTTCTTTGCGTCGGGGTTGGGGGAGGGCCGCTTCTCACGTCCCTGAGATCCCATTTGGGGTTTCGTGTATTGGGGGTAGAGTCCGACGACGTGGTTTTGAGTGCTGCGAGGATGTATTTTGGACTTGTTGATGGCGAATCCTTGAAGGTTCTTGTCGATGATGGGATCAAATTTATCGAGGATTATGCCCTGAAACGATCTGAGAGTGAGCTTTTTCATGCCATCATGGTGGATTTAGATGAAGTAGACCCCATGAATGGTGTTGGTGCGCCGCCTGCAGAGTTTTTGCGGATGGATGTTCTTACTGGGGCGAGAATGGCTCTTCTTCCCGAGGGAATTCTAGTAGTAAATGTTGTTCCTTTAAATGATTCATTATATGCGAAGATGATCGAGCTTTTTCGTATGGTTTTTTGTGATTTGTATGAGCTAAAAGTTGATGATGGTGAGAATTTTGTTATTGTTGCGACTTCTTCTCCAATTGGATCAATTGCAAGGCAGGTGAAGAACAAAAAAGGTAGTTTTTATGGGAAGTTGCAGCGGTTGAATTGCCATAGATTTATTGATGGTATTAAGAAGATTTGAGATTCGAAAGTTGATTAAGTTATGCTTACAAAGTAAGAAATGTCAACTTTTGTAGCTTTTTTGTCTGTTAATTTTAATTCAACCTGTAATTAATGAATACATCTTTAACTAATGAGAGATTCATCTTGTAGCATATTGAATTTAGAGTAGTTTACTTACAACTATTATGCTTTGATGATGCAAGCTTGTTAATTTATAAATGTATCATAAAACTAGATGTAATAGCCTTGGGATTCTTACCCACAATTACTCAAACTTTTAATATTGTCCATATAATATTAGAAATTTGAACATTTCTATTCTTTAATTTTTGTAGTTAAATCTATTAACATATTTTAATTAATGGTAAGAGAACCTTACTGCTCTCCCTC

Network for GWHGAAEX014923

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.210
SRP064423	SRR2545915	Juvenile tuber	5.000
SRP108465	SRR5643513	five period of Gastrodia elata	7.620
	SRR5643514	five period of Gastrodia elata	7.630
	SRR5643515	five period of Gastrodia elata	6.760
	SRR5643524	five period of Gastrodia elata	7.490
	SRR5643525	five period of Gastrodia elata	15.210
	SRR5643528	five period of Gastrodia elata	11.380
	SRR5643658	five period of Gastrodia elata	13.060
	SRR5643659	five period of Gastrodia elata	8.440
	SRR5643660	five period of Gastrodia elata	7.970
	SRR5643661	five period of Gastrodia elata	7.840
	SRR5643662	five period of Gastrodia elata	7.460
	SRR5643663	five period of Gastrodia elata	8.910
	SRR5643664	five period of Gastrodia elata	6.830
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.020
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.240
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.810
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.500
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.480
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.640
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.040
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.960
SRP279888	Gastro	Gastrodia elata tuber	7.52
	Juven	Juvenile tuber	15.32
	Mother_Gastro	Mother tuber of Gastrodia elata	9.86
	Mother_Juven	Mother tuber of Juvenile	12.60