Detail information of GWHGAAEX014924/evm.TU.scaffold_63.103


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428780952|ref|YP_007172738.1|2.00E-39Iron-sulfur cluster assembly accessory protein [Dactylococcopsis salina PCC 8305]
KOGKOG11202.00E-52Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain)
nrgi|672193926|ref|XP_008776163.1|2.12E-59PREDICTED: iron-sulfur assembly protein IscA, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9XIK3|ISCAP_ARATH7.00E-53Iron-sulfur assembly protein IscA, chloroplastic (Precursor)
trEMBLtr|M0SW66|M0SW66_MUSAM2.00E-57Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P06370_001}
TAIRAT1G105002.00E-52chloroplast-localized ISCA-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006221272452134688+
Transcript Sequence

Network for GWHGAAEX014924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01521.19Fe-S_biosyn631251.10E-06
PF01521.19Fe-S_biosyn1551964.70E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.770
SRR2545915Juvenile tuber76.240
SRP108465SRR5643513five period of Gastrodia elata82.660
SRR5643514five period of Gastrodia elata92.650
SRR5643515five period of Gastrodia elata84.400
SRR5643524five period of Gastrodia elata83.690
SRR5643525five period of Gastrodia elata95.800
SRR5643528five period of Gastrodia elata104.400
SRR5643658five period of Gastrodia elata122.970
SRR5643659five period of Gastrodia elata68.390
SRR5643660five period of Gastrodia elata78.780
SRR5643661five period of Gastrodia elata75.850
SRR5643662five period of Gastrodia elata103.130
SRR5643663five period of Gastrodia elata95.830
SRR5643664five period of Gastrodia elata104.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_178.550
SRR6049655Rhizomagastrodiae_C368-T10_good_168.380
SRR6049656Rhizomagastrodiae_C368-T07_good_174.260
SRR6049657Rhizomagastrodiae_C368-T07_good_175.220
SRR6049658Rhizomagastrodiae_C368-T04_good_173.630
SRR6049659Rhizomagastrodiae_C368-T04_good_173.730
SRR6049660Rhizomagastrodiae_C368-T01_good_168.690
SRR6049661Rhizomagastrodiae_C368-T04_good_161.570
SRR6049662Rhizomagastrodiae_C368-T01_good_166.120
SRR6049663Rhizomagastrodiae_C368-T01_good_159.660
SRR6049664Rhizomagastrodiae_C368-T10_good_186.070
SRR6049665Rhizomagastrodiae_C368-T10_good_186.070
SRP279888GastroGastrodia elata tuber 111.83
JuvenJuvenile tuber77.40
Mother_GastroMother tuber of Gastrodia elata 81.51
Mother_JuvenMother tuber of Juvenile 54.16