Gene detail

Detail information of GWHGAAEX014933/evm.TU.scaffold_63.112

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428319244\|ref\|YP_007117126.1\|	1.00E-107	surface antigen (D15) [Oscillatoria nigro-viridis PCC 7112]
nr	gi\|672158087\|ref\|XP_008798772.1\|	0	PREDICTED: outer envelope protein 80, chloroplastic-like isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q9C5J8\|OEP80_ARATH	0	Outer envelope protein 80, chloroplastic
trEMBL	tr\|M0U1K9\|M0U1K9_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P19020_001}
TAIR	AT5G19620	0	outer envelope protein of 80 kDa

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	2250217	2300509	-

Transcript Sequence
>GWHTAAEX014933 GCAGGGGAATGGCGAGAGGCGAGGATGTCCGCTTCATTTCGTCCTCCATTAAAATCCCTTCTTTTCCTAAACCCTATCCTTTCCTCCAAAGCTCGGCCCTTCCCTTTGCCGTTCAAAGCTTTTCCTTTCATCTACAGAGAGCCAAAGAGTCCATTCATCGGTTGGCCACTTCTCTTACTCGGACATGGGGGCGGACGGATCTCCTATGCTCGTCTTCGCTCTCCCTAAATCGGCTTGACCAGGAGCAGAATCCGCGGCGGTTGCAGCATGGAAAGGAGGACGAGGAGCGAGTCCTCATTAGCGAGGTTCTGATTCGGAACAAGGACGGCGACGTGCTTGAACGCACCGATCTCGAGGCCGCGGCCGCTGGATCGCTTAGGTTTAGCCGCCCTAATTCGGCACTAACAGTGCGAGAGGTGCAAGAAGACGTGCACCGTATTATTGATAGCGGCTTATTTTGTTCTTGCATGCCAGTAGCTGTAGACACGCGGGATGGGATCCGGTTGGTTTTTCAGGTTGAACCTAATCAAGAGTTTCATGGCTTAATATGTGAAGGAGCTAATGTTCTTCCATCCAAAATTTTGGAGGATGCATTTCGTGACGGACAAGGAAAAATAGTCAATATACGGCATCTGGACAAAATTATCAAGTCCATCAATGGGTGGTATATCGAGCGTGGATTCTTTGGAATGGTTTCAAATGTTGAGATTCTTTCTGGTGGAATACTCAAACTACAAGTTTCTGAAGCCGAGGTCAATAATATTAATTTAAGATTTCTTGATAGAAAAACCGGTGAACCCACAGAAGGAAGAACCAAAACTGACACCATACTTCGGCAACTCACAACAAAGAAGGGGCAGGTTTATAGTATGCTTCAAGGTAGACGAGATGTAGAGACAATCTTGACTATGGGGATAATGGAGGATGTGACCATTATTCCACAACCGAGTTCAGATGGGCATAAGGTGGATTTGGTTATGAATCTTGTTGAGCGCCCGAGTGGCGGTTTTTCAGCAGGTGGCGGAATATCAAGTGGGATTACAAATGGTCCTCTTTCTGGACTCATTGGAAGCTTTGCCTATTCTCATAGGAATGTTTTTGGGAGAAATCAAAAGCTCAACCTTTCATTAGAAAGGGGACAAATCGATTCCATATTTAGACTAAATTATAGTGATCCATGGATGGAAGGAGATGACAAGCGAACTTCTAAAACTATCATGATTCAGAATTCTAGAACTCCAGGAACTCTTGTTCATGGGGGTCAACTATCCGGTCATAGTGGCCTGACGATCAGTCGCGTTACTGCTGGTATCGAATTCGGTCGTCCAATTAGGCCTCAGTGGAGTGGAACTGCTGGTATAATATTTCAGCATGCTGGTGCTCGTGATGATAAAGGCAATCCCCTAATCAGAGATATTTATAATTGCCCTTTAACTGCAAGTGGCAATTCTTATGATCAAATGCTGATTATAAAACTTGAAGGTGTGTATACAGGATCTAATGACTATGGATCTACAATGTTTTCAGTCAATATGGAACAAGGGCTTCCAGTTCATTCAGAGTGGCTTTGTTTCAACAGAGTTGGTGCTCGTGCTAGACAAAGTTTAGAAGTTGGCCCGTTGCGGTTTCTTTTGAGCTTTTCTGGAGGCCACGTGGTGGGCAATTTCTCTCCTCACGAAGCATTTGTTATTGGAGGCACTAACAGTGTAAGAGGATATGAAGAAGGTGCAGTGGGTTCCGGACGTTCATATGCTGTTGGGAGTGCAGAGATGTCTTCCCGCTTGGTCGGACCAGTAGAAGTTGTGCTCTTTGGTGATTATGGCAGTGATCTCGGTTCAGGCTCAACTGTTCCTGGTGATCCCGCCGGAGCAAGAGGAAAGCCAGGCTACGGCCATGGGTACGGCGTTGGCATCCGCGTGGACTCCCCTTTGGGCCCTCTCCGCCTCGAATATGCCCTAAACGACAAATTCGCCAGGCGCTTCCATTTCGGAGTCGGCCATCGGAATTAAACTATTCTTTTGCTTTTCTAGGTCTTCATTAGGGCACTTTCATCGGCATCTTCTTCGCGCCCATTTTTGTTTAATCTCTTAAGAAACCCTAGACACACATTTTCATTCTCATTATATTCTGAAATGTATTCTTTTTTTATTAAAAAGGATTATTCTGTTTTTTTTGTGAGAAAATATTAAGCTTTAAAAATAGATATCTATTTTTGTATATAGTTCAGACTAAATGTGTG

Network for GWHGAAEX014933

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01103.22	Bac_surface_Ag	362	665	5.00E-45

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0019867	Cellular Component	outer membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.750
SRP064423	SRR2545915	Juvenile tuber	19.200
SRP108465	SRR5643513	five period of Gastrodia elata	25.870
	SRR5643514	five period of Gastrodia elata	23.330
	SRR5643515	five period of Gastrodia elata	24.250
	SRR5643524	five period of Gastrodia elata	23.750
	SRR5643525	five period of Gastrodia elata	13.210
	SRR5643528	five period of Gastrodia elata	8.440
	SRR5643658	five period of Gastrodia elata	10.360
	SRR5643659	five period of Gastrodia elata	34.930
	SRR5643660	five period of Gastrodia elata	42.550
	SRR5643661	five period of Gastrodia elata	39.110
	SRR5643662	five period of Gastrodia elata	46.480
	SRR5643663	five period of Gastrodia elata	43.400
	SRR5643664	five period of Gastrodia elata	53.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.870
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.300
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	25.350
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	29.770
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.990
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	23.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.930
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.190
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.200
SRP279888	Gastro	Gastrodia elata tuber	56.66
	Juven	Juvenile tuber	52.29
	Mother_Gastro	Mother tuber of Gastrodia elata	32.68
	Mother_Juven	Mother tuber of Juvenile	53.28