Detail information of GWHGAAEX014941/evm.TU.scaffold_63.121


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|406024929|ref|YP_006705230.1|3.00E-09Ubiquitin specific protease [Cardinium endosymbiont cEper1 of Encarsia pergandiella]
KOGKOG18671.00E-156Ubiquitin-specific protease
nrgi|743766208|ref|XP_010913339.1|0PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like isoform X2 [Elaeis guineensis]
Swissprottr|Q9LEW0|UBP22_ARATH4.00E-157Ubiquitin carboxyl-terminal hydrolase 22
trEMBLtr|M5VV68|M5VV68_PRUPE0Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}
TAIRAT5G107901.00E-156ubiquitin-specific protease 22

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006224981962533666+
Transcript Sequence

Network for GWHGAAEX014941

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02148.18zf-UBP671251.50E-08
PF00443.28UCH2025673.20E-53
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUSP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006511Biological Processubiquitin-dependent protein catabolic process
GO:0016579Biological Processprotein deubiquitination
GO:0036459Molecular Functionthiol-dependent ubiquitinyl hydrolase activity
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.370
SRR2545915Juvenile tuber7.900
SRP108465SRR5643513five period of Gastrodia elata6.840
SRR5643514five period of Gastrodia elata5.200
SRR5643515five period of Gastrodia elata7.390
SRR5643524five period of Gastrodia elata5.030
SRR5643525five period of Gastrodia elata9.730
SRR5643528five period of Gastrodia elata9.670
SRR5643658five period of Gastrodia elata6.910
SRR5643659five period of Gastrodia elata8.670
SRR5643660five period of Gastrodia elata11.180
SRR5643661five period of Gastrodia elata8.410
SRR5643662five period of Gastrodia elata10.100
SRR5643663five period of Gastrodia elata7.040
SRR5643664five period of Gastrodia elata7.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.100
SRR6049655Rhizomagastrodiae_C368-T10_good_110.160
SRR6049656Rhizomagastrodiae_C368-T07_good_18.230
SRR6049657Rhizomagastrodiae_C368-T07_good_18.060
SRR6049658Rhizomagastrodiae_C368-T04_good_18.010
SRR6049659Rhizomagastrodiae_C368-T04_good_17.650
SRR6049660Rhizomagastrodiae_C368-T01_good_19.610
SRR6049661Rhizomagastrodiae_C368-T04_good_17.430
SRR6049662Rhizomagastrodiae_C368-T01_good_17.680
SRR6049663Rhizomagastrodiae_C368-T01_good_17.850
SRR6049664Rhizomagastrodiae_C368-T10_good_17.460
SRR6049665Rhizomagastrodiae_C368-T10_good_17.460
SRP279888GastroGastrodia elata tuber 7.03
JuvenJuvenile tuber16.50
Mother_GastroMother tuber of Gastrodia elata 10.57
Mother_JuvenMother tuber of Juvenile 24.85