Gene detail

Detail information of GWHGAAEX014947/evm.TU.scaffold_63.130

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|430742304\|ref\|YP_007201433.1\|	2.00E-19	protein kinase family protein [Singulisphaera acidiphila DSM 18658]
nr	gi\|743767128\|ref\|XP_010913816.1\|	0	PREDICTED: protein LYK5-like [Elaeis guineensis]
Swissprot	tr\|O22808\|LYK5_ARATH	2.00E-169	Protein LYK5 (Precursor)
trEMBL	tr\|A0A068UUC7\|A0A068UUC7_COFCA	0	Coffea canephora
TAIR	AT2G33580	6.00E-169	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	2715543	2718054	-

Transcript Sequence
>GWHTAAEX014947 TTAGGTATATTTATAATTTTAATATTTATGGGTAGGTATATCTATAATTTTCAACGCTGAACGCCGGTCAGTTCGTCTGCTGGGCTCGTAATCCTCTTGTATGTTCCAGCAACCACGACGGCTAACAGATTAATCGCCCAAGCTCCGAAACCCTAGTCCATGGCGTTCTCCTTCCTCGGCCTTCTACTCGTCTTCCCCTTTTTCCCCTCATACTTCTCTCAGCAGCCGTACATCAACAACGCCCAGGACAACTGCTACGGATCGAACGACTCGGCCGCCTTGGGATATGCCTGCAACGGTGCCCAGCCTTCATGCTCCTCCTTCATCACCTTCCGCGCAGAATCGCCCTACGACTCGCCGGCGCTCATCGCCTTCCTCTTATCCACTGCTGCCTCCAACATCTCCCGCGTCAACTCCGTCTCGGACGTCTCCGTTTTTCGAACCGGCGATCTCGTTCTGGTCCCCATCCCGTGCTCCTGCTCCGATCGATTCTACCAGCACAACGCCTCCTACACCATCAAGTCTCGATCGGAAACCTACTTCTCCATCGCCAACAGCACCTACCAGGGGCTATCCACTTGCCAGGCCCTGATGGATCAGAACGCGATCGACAGCCGCGGTCTCTCCGTCGGCGAAGAGCTTCTCGTTCCGCTCCGCTGCGTCTGCCCAACCGTAAACCAAACTAGATCAGGCATCAAGTATCTCCTAAGCTACCTCATCACCTGGGGCGATCAGATCAGCTCCATCGCCCAAACCCTAGATGCCGATTTCCGATCCATCTTAGCTGCCAACGAAATCAGCGAAAAATCGTCGATCTTTCCCTTCACCACCCTTCTGATTCCCCTTTCCAAGGAACCCACCGCAATCCGCTCTCCCCCGCCTTCCCCTGCGCCCAATATTCCCGCACCCAAATCACCATCATCAGGTGGCGGACACGCCGGGATGATTGCTGGAATCGTCATCGGCGTTTTTCTGCTTCTTCTTGCCTGCGCGCTTGTTATTTTCTTCTTCTTGCGTCTGCGGCCTCCGAAGCTTTCCAAGAAAGAGCTGGTTTCCGGCATCACTGAATACAGCGATCTTCCCTTCAAATCGACTTCTATGTCGACGACGACTCCGACGACACTCTCTCCCCTTGCGTCCAGCTTGCGAGGCGCGCTCGACTGGATCGCAGTTTATAAGTTCGAGGAGCTGCAAGCAGCTACCGGAGGCTTCGACGATGCTCATCGGATCAGAGGCATGGTGTATCGAGGGATTATCAATGGTGACGTTGCCGCCATCAAGCGATTGAAAGGAGATGCTTCTAATGAAATCAGCATTCTGAAGCAAATTAACCATTCCAGTCTGATCCGACTCTCTGGATTCTGCCTGCACGATGGGGATACCTACATGGTGTATGAGTATGCGGAATTCGGATCCCTCAGTGATTGGCTGCATCACAGGGGGAACTTCAACGATTCCTCTTGCCTCAGCTGGAAGCAGAGGATCCAGATTGCTTGCGACATCGCTGATGGATTGAACTATCTTCACAATTACACCAATCCTCCTTACATTCACAAGAATCTGAAGAGCAGCAATGTGATGATTGGGAGGGATTTCAGGGCAAAAGTTGGGAATTTCGGGCTCGCCAGGCCCGCAGTGGATCCGCAGCTTACAAGGCATATTGTTGGCACGAAGGGGTACATGGCGCCGGAGTATCTTGAGCACGGCGTTATAACTTCGAAGGTGGATGTTTTTGCATTCGGTGTGGTTTTGCTTGAGCTTTTGAGCGGCAGAGAAGCCATTTTTGAGAGAAGAGGGGTGGGTGAGGAGGAAGGGGGGGAGATGCTTCTTCTGTCTTCTACCATAGGGGATGTTCTCTCTGGAGAAAATGCGAAGGCTGAACTGCGGAGTTTTGTCGACGATTGCTTGAGAGAAGATTACCCCTTCGAGTTAGCTTTTGCAACAGCTGAGTTAGCTAAGAGGTGTGTGTCTAATGATTCCCTTTCAAGGCCTACAATGAATGAGCTGCTGTTATCTCTTTCAGCCATTTATAACTCTACTCTCGACGGGAATTCGGGAGAGTCCTCGGGCTCTCGCTCGATGCCGGCTGTGTATGGTAGGTAGGAAGGCATTGAATTGAGCTCGTTTCAGAATGAACATCGCTTTGGGACATGTGAATTTTACATGCAAATTTAGGTTTTCTTACATTTTTTTGCTTAATTGTCCCTTCCTAAAAGTTGGCATGAGGATAAGATTTGTTCACTCCATGCCAAGCTTGTTCAGCACCCCATCTCTTTGAGGGGTTTTATGTTGTCTCTTTATGATTATTGAAGGAGAAGATTGAGGTGGGGATTATAATAGATTTTTTTATATATTTTTTCAAGTTATTGTTGCTATTATAACAACTAGACAAAATACTGTTTTGTTTCAACGTTTGGATTATGTATATATTATTAGTTTTGCGAGTGTTTTTTATTTGATACATTTGTTGTTTTGTGACTTCAATTTATGGAAAACTCATTTTATGTGCTGA

Network for GWHGAAEX014947

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01476.19	LysM	118	164	0.036
PF01476.19	LysM	190	228	0.00068
PF00069.24	Pkinase	378	617	4.10E-37

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_LysM

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	23.740
SRP064423	SRR2545915	Juvenile tuber	25.520
SRP108465	SRR5643513	five period of Gastrodia elata	34.950
	SRR5643514	five period of Gastrodia elata	54.510
	SRR5643515	five period of Gastrodia elata	70.240
	SRR5643524	five period of Gastrodia elata	54.360
	SRR5643525	five period of Gastrodia elata	44.120
	SRR5643528	five period of Gastrodia elata	50.150
	SRR5643658	five period of Gastrodia elata	43.060
	SRR5643659	five period of Gastrodia elata	41.970
	SRR5643660	five period of Gastrodia elata	26.530
	SRR5643661	five period of Gastrodia elata	37.480
	SRR5643662	five period of Gastrodia elata	39.620
	SRR5643663	five period of Gastrodia elata	31.160
	SRR5643664	five period of Gastrodia elata	57.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	60.710
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	56.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	55.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	48.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	52.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	57.690
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	81.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	47.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	50.620
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	85.930
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	50.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	50.110
SRP279888	Gastro	Gastrodia elata tuber	22.92
	Juven	Juvenile tuber	26.51
	Mother_Gastro	Mother tuber of Gastrodia elata	88.48
	Mother_Juven	Mother tuber of Juvenile	81.20