Gene detail

Detail information of GWHGAAEX014951/evm.TU.scaffold_63.134

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743808400\|ref\|XP_010928331.1\|	0	PREDICTED: uncharacterized protein LOC105050133 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9FG38\|SNX1_ARATH	3.00E-06	Sorting nexin 1
trEMBL	tr\|M0RYJ4\|M0RYJ4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P09850_001}
TAIR	AT3G15920	6.00E-154	Phox (PX) domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	2885545	2902797	-

Transcript Sequence
>GWHTAAEX014951 TTGGGAATTCTAAAAATATTAGGACACCGTGCTGAGTGCGTTTTTGCTCAGAACTCCAGACTCGGGATTCCGGGGAGTATGAGAAGGGAGGAGTTCCCTGCTAACGAGGTCGGTCCGGTGGACGCAATAGGATTGAAGTCTCCGGAGAGATTAGCCGAATCGCTTCACCGCCATTGTTTCAACCTCTCACGGCTGGCTCTGTCTCTTCCAGATCGCGATTGCCTGTATCGATCGTTAGCGGGGAGGGGATGCCGAGGTCCAGCCCGCCAAAGCACCGCCATGACGGCACCTCGCCGCTCCCCCTCGGCATGGATTGGAGCCCTCCGCCTAGGAAATGGGAAGGAAGAAACACTATTTGGCCGCATGATTCCAGAACAGGTTGGAGTTACTGTGTCATGATTCCCTCATGGATGGTTGAAACTGGATCTGGAGCATCAAGTGACAGCTTATTGAACCCTATAATTTTTTACAGGATCCAAATTGGTATACAGTCGCCAGAAGGTGTTAGCAGCAGTCATGATGTACTTCGTAGGTTCAGTGACTTCCTGAAGTTATTTTATGCTCTTAAAAAGGTATATCCCAAGAAGGACATCCCCCCTGCTCCACCAAAGCGTGCTTTGTTGAGAATTAATTCTAGCAGACTGCTCTTAGAAGAGAGAAGGCGGGCTTTAGAGGAATGGACAGGAAAGCTTCTCGCTGACATAGACCTATCACGAAGTGCTCATATTGCTACTTTTCTCGACCTAGAAGCTGCTGCGAGATCATCTTTTGAGGACACCAATGAGGGCACTTTAAAAGCAAGCACGTCAAGAGATGCATTGTCTAGTCTTCCTAGAAGATCCAGCTCAAGTGTTTCTGCAGAGTGCTCTTCAGTAGCTTCAAAACCTCATTCACCAGCATCAGATGTTTCAATTGACACTGGATTCAATAAAAATTTCGCTGGAGAAGCAAGCAACGATACAATGGGGATGGCTGCAATTTTCAACCAATCAGAGGAATTCCCTAATGGTAATTTGCCTCAAAGCAAAGGCAGCTCTTGGTTTGGAGGTGATTCTTCTTACAAGAATTCTTCCAAGCAGATGCCCCATTTAAGAGACATAGTTGATACCACTACAAATCAGAATCACGAGAAACTTTCTTTTCATTCTAGGAAGCTTTCTGCTGAGAGCATCGGTAGTGATACAAGTTCTATTAGAACTATTGATTTGTTGCCTGGGGTTACCAGCTCATTTTGGGATGGTTCTAATGATTTTTCTGGCGGTGGTGTATTCCCAACTAACCTGGAAGCTCCAAGTAATCCAGAAAAACAATTCTCAAACGATGTGCAAGTTCTTATTCCTATTGATCAGCAGCAAAAATTGAATCGAGTTCTTTTTACCATGGAACGTAGATTCATGACAGCTAGAACAGATATGGAGGATATTATAACGCGATTAAATCAAGAAATGACAGTGAAAGAGTACCTTACAACTAAGGTGAAGGATTTAGAAGCAGAGCTTGAATTAACTAAACAGAGATATAAAGAAAATCTTCAGCAAGCCATCTTACTTGAAAGAGAAAGATTCACTCAAACCCAATGGGATATGGATGAACTTCGTAGGAAGTGTTTAGAGTTGGAATCGAAACTCAAGCTTGAGCAGGGTGAAAAGAATCGTGTAGAGCCGGAAAGCACAACAAGTGGTGAAAAAGAAATATTACTTCAAGAACTGTCTGTTAAACAAGATCAGATTGTGAATCTAGAAAGGCATCTAGAACAACTTGAGTTGAAATCAAAGGCCGATATTAAAGTTCTTGTGAAAGAAGTAAAGCTTCTTAGAAACTCTCAGGAGGAGCTGAAGAAAATGCTTAGCCGATCTACTAAAGAAAAGGATGACATTGAGAGAGTTCTTCAAGAAGAAAGAGAAGGGTGTGCGGTGGCCAACTGCAGAAGGAAGAAGCTGCTTCGTGAATGTGAATCTCTTCGCAGTCAGCTTAAGGAGTGCAGTGTGAATTTCCTTTCAGCAGAAAAAGATGGTTTCACTGTCAATCAGCAATCCCTAAATGATGCTTTGGGGCTCCTCGAAACCTCCAATAATCGAATTGGCCTCCTCATCGCTGAGACACGATTGCTTGTCGAAGAAGACGAGGAAGAGCGCGCCGACCCAATGAATGCTAACGATTCAAATGTGGGGGATGAGATGAGGAGCATGCTGGTAGGCGCGCTGATGGACAATGCGATGCTGAGGAAGCAGTTGAATTCTGTATTCCGGTGCGCCCTCAAAGCCTTCTTCGAGGCGGCGGACGGGAAGAGCGGCGGGGATGGCGAGACTCCCTCCCAAAAAACCATCCTGAACAGGCTTCTATGGAGGTGAAAAGTATCAAAATTGTAGTGTTGAGTAAAAAGTCTTAAAAAAATCTGTTTGTTGCATGTAAATTAGCTGCAAATTTATCCATGAAAACTCTTAAGGGATAATTATATTTACATAATATCTAAATTTTGGTATTTATAAAATAAATGCTAAATTAAAATAAAGTTTCACTC

Network for GWHGAAEX014951

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00787.23	PX	74	165	1.00E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0035091	Molecular Function	phosphatidylinositol binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	48.220
SRP064423	SRR2545915	Juvenile tuber	38.820
SRP108465	SRR5643513	five period of Gastrodia elata	41.150
	SRR5643514	five period of Gastrodia elata	36.090
	SRR5643515	five period of Gastrodia elata	37.950
	SRR5643524	five period of Gastrodia elata	37.790
	SRR5643525	five period of Gastrodia elata	49.440
	SRR5643528	five period of Gastrodia elata	44.370
	SRR5643658	five period of Gastrodia elata	63.970
	SRR5643659	five period of Gastrodia elata	42.330
	SRR5643660	five period of Gastrodia elata	49.700
	SRR5643661	five period of Gastrodia elata	43.260
	SRR5643662	five period of Gastrodia elata	46.250
	SRR5643663	five period of Gastrodia elata	47.740
	SRR5643664	five period of Gastrodia elata	50.540
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	51.070
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	55.190
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.450
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	63.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	31.310
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	36.720
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	41.050
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	28.800
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.480
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	27.560
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	33.460
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	33.460
SRP279888	Gastro	Gastrodia elata tuber	44.40
	Juven	Juvenile tuber	77.55
	Mother_Gastro	Mother tuber of Gastrodia elata	49.20
	Mother_Juven	Mother tuber of Juvenile	63.95