Gene detail

Detail information of GWHGAAEX014960/evm.TU.scaffold_63.144

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2262	Sexual differentiation process protein ISP4
nr	gi\|645216088\|ref\|XP_008219410.1\|	PREDICTED: oligopeptide transporter 1-like [Prunus mume]
Swissprot	tr\|Q9SUA4\|OPT5_ARATH	Oligopeptide transporter 5
trEMBL	tr\|M5W471\|M5W471_PRUPE	Uncharacterized protein {ECO:0000313\|EMBL:EMJ08489.1}
TAIR	AT4G26590	oligopeptide transporter 5

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000062	3116894	3130403	+

Transcript Sequence
>GWHTAAEX014960 ATGTCGGGAAAGGTGCAAAGTGCAGAGTGGGTCAACCCCCGATCCACGCGGCACTGTGGGCGGGCCCCACGCGTGGGCGATCAATGTGCACTTGGGAGCGCGCTACTGGAGGAGAATGACCATCCGATCGAGCAAGTGAGGCTGACAGTGGATCCCACCGACAACCCGACCTTGCCGGTGTTGACTTGGCGTGCATGGGTCCTCGGCGTCTCATCCTGCGCTCTGCTTTCCTTCACAAACACATTCTTCGGATACCGAACGAACCCTATTTCTGTTGGATCCGTTTGCGTCCAAATTATCACACTTCCCATAGGGAGGTTGCTAGCAAGTGCTCTGCCTAATAGGCTCATAAGAATCCCCTTCACAAGTTGGTGCTTCTCACTCAATCCAGGACCTTTCTCCATGAAGGAGCACTGCCTTATCACCATCTTCGCCGGAGTCGGCAGCGGAGGAGCTGCCATTGCGATAATAACCATTGTTAAGGCCTTTTATCATAGGCAGATCAACCCAATTGCAGCCATGCTGTTAGTACTAACCACGCAGATGTTTGGCTACGGTTGGGCTGGTGTTTTCAGAAAGTACCTGGTGGATTCTCCATATATGTGGTGGCCAGCAAAACTTGTCCAAGTCTCTCTTTTCAAAGCACTGCATCTTAAGGAGAAGAGGGAGAAAAGAAGGCTGACCACATTTCAGTTTTTTACGATAGTCTTCATCGGAAGCTTTGCTTACTATGCCTTTCCAGGATTTCTCTTCCCATCCATCTCCAGCATTTCTATTCTCTGCCTAATTTATAAAGAGTCCATCACAATGCAGCAGATTGGGTCTGGACTCAGCGGGCTTGGCATTGGATCGTTCGGTCTCGATTGGTCCACCGTTGTTGGATTCCTCGGCAGCCCGCTGGCGACTCCGACGACGGCGATATTCAACATAATGATAAGCTACGTCTTCATAGTTTACGCGCTATTGCCGCTCGGGTATTGGACAAACACTTACAGCGCCAAACGCTTTCCACTCATTTCTGCCGATGTCTTCGCCAGTCTAACGGCTACAGTCACTCACGTTGCTCTCTATCACGGAAAGTACGTATGCATCAAAAGATATATCATTTTGCATGAATGTAATAGTTCGTTACAAATTCATTTATGTGATTGTTTGTTACACATGAATGAATGTGATCGAACACATTTCGTTGTTTTAAAATTTCTCAGGGATATTTATAAGATGCTGAAAAAATCAAAGGAATATGCTGCTGACAAAAGGGAAGATGTTCATACAAGACTGATGAAGAGAAATTATGAGCGTGTGCCTCAATGGTGGTTCCTGGTTCTCTTAGTTCTAGTCTTTGGACTCTCCATATTTACTTGCATGGGGTTTGACAGAAAGCTACAGCTTCCATGGTGGGGTGTGCTACTGTCCTGCGGATTGGCACTCTTCTTCACATTACCTGTAGGAGTCATTGTGGCAACGACTAATATGGGACCAGGGTTAAATGTTCTTTCAGAGTACATCATGGGCGTCATGTTGCCTGGAAAACCTTTAGCAAATGTAACATTCAAAACATATAGCATCTTAACTATGGGGCACGCGCTCTCACTTCTTAGTGACTTAAATCTGGGGCACTACATGAAAATACCCCCAAAATCAATGTTCATCACACAGTGCACAGGAACGATTATAGGATCTTTAGTTTCCTTTGGAACAGCTTGGCTACTTCTTGACTCTATGGTGAATATATGTGACCCAAGCAAGCTTCCCCCAGAGAGCCCATGGACATGCCCCGGCGACAACGTCTTCTACAATGCATCCATCATATGGGGACTTGTGGGGCCGAAGAGAATGTTTGGCAAACTTGGGCACTACTCTGCTTTGAAATACTTCTTCCTCATAGGTTTTTTGCTGCCCATCCCATTCTGGCTGCTTGCAGTAGCCTTTCCTCAGAAAAAATGGCTGAGGCACATCCACATTCCGCTCCTTATCGCCGGCGGATCGAGCGTTCCGCCGGTGCACTCAGTGAACTATATTATGTGGGGAGCAGTTGGTATCTTCTTCAACTATTATGTGTACAAGAGGTATAAGAACTGGTGGGCAAGGCACACTTATGTGATGTCAGCTGCTTTAGATGCTGGGGTAGCCTTTATGGCAATACTCATATATTTTGCTCTACAATCAAATAACATATATGGGATAGATTGGTGGGGAGGGGCTGCTTCGGATCACTGCCCACTGGCAAACTGCCCTACGGCACCTGGAGTGATTGTTCAAGGCTGCCCTATAAATTAA

Network for GWHGAAEX014960

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03169.14	OPT	61	720	1.50E-142

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055085	Biological Process	transmembrane transport

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.100
	SRR5643514	five period of Gastrodia elata	0.150
	SRR5643515	five period of Gastrodia elata	0.130
	SRR5643524	five period of Gastrodia elata	0.030
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.030
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.030
	SRR5643661	five period of Gastrodia elata	0.030
	SRR5643662	five period of Gastrodia elata	0.030
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.060
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.100
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.110
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.020
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.020
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.020
SRP279888	Gastro	Gastrodia elata tuber	0.27
	Juven	Juvenile tuber	1.56
	Mother_Gastro	Mother tuber of Gastrodia elata	1.03
	Mother_Juven	Mother tuber of Juvenile	2.07