Detail information of GWHGAAEX014981/evm.TU.scaffold_63.170


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198654|ref|YP_003269863.1|7.00E-109mandelate racemase/muconate lactonizing protein [Haliangium ochraceum DSM 14365]
nrgi|743772298|ref|XP_010916455.1|0PREDICTED: L-Ala-D/L-amino acid epimerase isoform X1 [Elaeis guineensis]
Swissprottr|B9I2J6|AXEP_POPTR5.00E-176L-Ala-D/L-amino acid epimerase
trEMBLtr|C5XQP6|C5XQP6_SORBI0Putative uncharacterized protein Sb03g006670 {ECO:0000313|EMBL:EES00349.1}
TAIRAT3G182704.00E-160cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006234817803489196+
Transcript Sequence

Network for GWHGAAEX014981

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02746.15MR_MLE_N631731.90E-07
PF13378.5MR_MLE_C1973728.90E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016855Molecular Functionracemase and epimerase activity, acting on amino acids and derivatives

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.560
SRR2545915Juvenile tuber7.830
SRP108465SRR5643513five period of Gastrodia elata7.830
SRR5643514five period of Gastrodia elata9.360
SRR5643515five period of Gastrodia elata8.350
SRR5643524five period of Gastrodia elata9.350
SRR5643525five period of Gastrodia elata7.870
SRR5643528five period of Gastrodia elata7.100
SRR5643658five period of Gastrodia elata7.040
SRR5643659five period of Gastrodia elata9.080
SRR5643660five period of Gastrodia elata9.810
SRR5643661five period of Gastrodia elata8.870
SRR5643662five period of Gastrodia elata8.960
SRR5643663five period of Gastrodia elata9.730
SRR5643664five period of Gastrodia elata8.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.760
SRR6049655Rhizomagastrodiae_C368-T10_good_112.350
SRR6049656Rhizomagastrodiae_C368-T07_good_18.960
SRR6049657Rhizomagastrodiae_C368-T07_good_17.440
SRR6049658Rhizomagastrodiae_C368-T04_good_18.660
SRR6049659Rhizomagastrodiae_C368-T04_good_17.530
SRR6049660Rhizomagastrodiae_C368-T01_good_17.770
SRR6049661Rhizomagastrodiae_C368-T04_good_17.510
SRR6049662Rhizomagastrodiae_C368-T01_good_111.300
SRR6049663Rhizomagastrodiae_C368-T01_good_111.200
SRR6049664Rhizomagastrodiae_C368-T10_good_19.870
SRR6049665Rhizomagastrodiae_C368-T10_good_19.870
SRP279888GastroGastrodia elata tuber 12.29
JuvenJuvenile tuber9.68
Mother_GastroMother tuber of Gastrodia elata 13.93
Mother_JuvenMother tuber of Juvenile 12.47