Detail information of GWHGAAEX014989/evm.TU.scaffold_63.179
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 4.00E-22 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|672119636|ref|XP_008783060.1| | 0 | PREDICTED: protein NSP-INTERACTING KINASE 1-like [Phoenix dactylifera] |
| Swissprot | tr|Q9LFS4|NIK1_ARATH | 0 | Protein NSP-INTERACTING KINASE 1 (Precursor) |
| trEMBL | tr|A0A067EYD3|A0A067EYD3_CITSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:KDO58880.1} |
| TAIR | AT5G16000 | 0 | NSP-interacting kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000062 | 3814017 | 3819897 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014989
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13855.5 | LRR_8 | 33 | 92 | 7.90E-09 |
| PF00069.24 | Pkinase | 242 | 506 | 7.30E-43 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-II |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.780 |
| SRR2545915 | Juvenile tuber | 9.380 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.550 |
| SRR5643514 | five period of Gastrodia elata | 23.040 | |
| SRR5643515 | five period of Gastrodia elata | 10.370 | |
| SRR5643524 | five period of Gastrodia elata | 15.600 | |
| SRR5643525 | five period of Gastrodia elata | 92.280 | |
| SRR5643528 | five period of Gastrodia elata | 32.450 | |
| SRR5643658 | five period of Gastrodia elata | 72.790 | |
| SRR5643659 | five period of Gastrodia elata | 11.960 | |
| SRR5643660 | five period of Gastrodia elata | 9.030 | |
| SRR5643661 | five period of Gastrodia elata | 9.370 | |
| SRR5643662 | five period of Gastrodia elata | 13.250 | |
| SRR5643663 | five period of Gastrodia elata | 10.460 | |
| SRR5643664 | five period of Gastrodia elata | 12.020 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.880 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.910 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 12.240 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 12.690 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.820 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.110 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.140 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.090 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.090 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.88 |
| Juven | Juvenile tuber | 26.89 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.88 | |
| Mother_Juven | Mother tuber of Juvenile | 1.88 |