Detail information of GWHGAAEX015002/evm.TU.scaffold_63.196


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743865580|ref|XP_010904865.1|1.75E-54PREDICTED: transcription factor bHLH149-like [Elaeis guineensis]
Swissprottr|Q9LSN7|BH147_ARATH5.00E-27Transcription factor bHLH147
trEMBLtr|I1HDT8|I1HDT8_BRADI5.00E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G08540.1}
TAIRAT3G171002.00E-26sequence-specific DNA binding transcription factors

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006240528584054171+
Transcript Sequence

Network for GWHGAAEX015002

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.690
SRR2545915Juvenile tuber18.280
SRP108465SRR5643513five period of Gastrodia elata40.670
SRR5643514five period of Gastrodia elata52.860
SRR5643515five period of Gastrodia elata51.710
SRR5643524five period of Gastrodia elata46.110
SRR5643525five period of Gastrodia elata153.540
SRR5643528five period of Gastrodia elata103.830
SRR5643658five period of Gastrodia elata193.060
SRR5643659five period of Gastrodia elata30.450
SRR5643660five period of Gastrodia elata22.620
SRR5643661five period of Gastrodia elata29.240
SRR5643662five period of Gastrodia elata27.770
SRR5643663five period of Gastrodia elata22.470
SRR5643664five period of Gastrodia elata28.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.510
SRR6049655Rhizomagastrodiae_C368-T10_good_1104.800
SRR6049656Rhizomagastrodiae_C368-T07_good_175.500
SRR6049657Rhizomagastrodiae_C368-T07_good_149.960
SRR6049658Rhizomagastrodiae_C368-T04_good_156.290
SRR6049659Rhizomagastrodiae_C368-T04_good_154.440
SRR6049660Rhizomagastrodiae_C368-T01_good_153.870
SRR6049661Rhizomagastrodiae_C368-T04_good_157.070
SRR6049662Rhizomagastrodiae_C368-T01_good_154.700
SRR6049663Rhizomagastrodiae_C368-T01_good_150.780
SRR6049664Rhizomagastrodiae_C368-T10_good_171.090
SRR6049665Rhizomagastrodiae_C368-T10_good_171.090
SRP279888GastroGastrodia elata tuber 35.88
JuvenJuvenile tuber16.51
Mother_GastroMother tuber of Gastrodia elata 61.92
Mother_JuvenMother tuber of Juvenile 31.46