Detail information of GWHGAAEX015009/evm.TU.scaffold_63.204


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719971592|ref|XP_010275122.1|1.89E-47PREDICTED: 60S ribosomal protein L18a-like protein [Nelumbo nucifera]
Swissprottr|Q8L9S1|R18AL_ARATH2.00E-2560S ribosomal protein L18a-like protein
trEMBLtr|V4U033|V4U033_9ROSI7.00E-44Uncharacterized protein {ECO:0000313|EMBL:ESR55531.1}
TAIRAT1G170803.00E-40Ribosomal protein L18ae family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006242069334240986-
Transcript Sequence

Network for GWHGAAEX015009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms78.840
SRR2545915Juvenile tuber70.550
SRP108465SRR5643513five period of Gastrodia elata82.300
SRR5643514five period of Gastrodia elata85.430
SRR5643515five period of Gastrodia elata81.680
SRR5643524five period of Gastrodia elata84.460
SRR5643525five period of Gastrodia elata182.740
SRR5643528five period of Gastrodia elata170.550
SRR5643658five period of Gastrodia elata202.050
SRR5643659five period of Gastrodia elata73.210
SRR5643660five period of Gastrodia elata70.450
SRR5643661five period of Gastrodia elata75.840
SRR5643662five period of Gastrodia elata83.270
SRR5643663five period of Gastrodia elata76.510
SRR5643664five period of Gastrodia elata87.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_165.680
SRR6049655Rhizomagastrodiae_C368-T10_good_1112.890
SRR6049656Rhizomagastrodiae_C368-T07_good_170.530
SRR6049657Rhizomagastrodiae_C368-T07_good_170.020
SRR6049658Rhizomagastrodiae_C368-T04_good_157.440
SRR6049659Rhizomagastrodiae_C368-T04_good_157.310
SRR6049660Rhizomagastrodiae_C368-T01_good_161.720
SRR6049661Rhizomagastrodiae_C368-T04_good_161.670
SRR6049662Rhizomagastrodiae_C368-T01_good_152.580
SRR6049663Rhizomagastrodiae_C368-T01_good_152.360
SRR6049664Rhizomagastrodiae_C368-T10_good_192.980
SRR6049665Rhizomagastrodiae_C368-T10_good_192.980
SRP279888GastroGastrodia elata tuber 58.74
JuvenJuvenile tuber82.13
Mother_GastroMother tuber of Gastrodia elata 99.75
Mother_JuvenMother tuber of Juvenile 90.13