Detail information of GWHGAAEX015014/evm.TU.scaffold_63.212_evm.TU.scaffold_63.214


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17212.00E-113FOG: Zn-finger
nrgi|514787958|ref|XP_004971461.1|2.11E-118PREDICTED: zinc finger protein NUTCRACKER-like [Setaria italica]
Swissprottr|Q9ZWA6|IDD3_ARATH5.00E-114Zinc finger protein MAGPIE {ECO:0000303|PubMed:17785527}
trEMBLtr|A0A061E4I0|A0A061E4I0_THECC2.00E-115C2H2 and C2HC zinc fingers superfamily protein {ECO:0000313|EMBL:EOX99537.1}
TAIRAT1G038402.00E-113C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006245130664516104+
Transcript Sequence

Network for GWHGAAEX015014

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.490
SRR2545915Juvenile tuber5.970
SRP108465SRR5643513five period of Gastrodia elata5.190
SRR5643514five period of Gastrodia elata10.430
SRR5643515five period of Gastrodia elata9.620
SRR5643524five period of Gastrodia elata10.990
SRR5643525five period of Gastrodia elata6.650
SRR5643528five period of Gastrodia elata5.230
SRR5643658five period of Gastrodia elata9.250
SRR5643659five period of Gastrodia elata2.600
SRR5643660five period of Gastrodia elata4.070
SRR5643661five period of Gastrodia elata7.640
SRR5643662five period of Gastrodia elata10.830
SRR5643663five period of Gastrodia elata6.580
SRR5643664five period of Gastrodia elata9.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.700
SRR6049655Rhizomagastrodiae_C368-T10_good_15.530
SRR6049656Rhizomagastrodiae_C368-T07_good_17.730
SRR6049657Rhizomagastrodiae_C368-T07_good_18.970
SRR6049658Rhizomagastrodiae_C368-T04_good_112.250
SRR6049659Rhizomagastrodiae_C368-T04_good_111.460
SRR6049660Rhizomagastrodiae_C368-T01_good_113.950
SRR6049661Rhizomagastrodiae_C368-T04_good_19.660
SRR6049662Rhizomagastrodiae_C368-T01_good_16.450
SRR6049663Rhizomagastrodiae_C368-T01_good_112.580
SRR6049664Rhizomagastrodiae_C368-T10_good_110.410
SRR6049665Rhizomagastrodiae_C368-T10_good_110.410
SRP279888GastroGastrodia elata tuber 6.50
JuvenJuvenile tuber1.56
Mother_GastroMother tuber of Gastrodia elata 8.28
Mother_JuvenMother tuber of Juvenile 5.09