Detail information of GWHGAAEX015019/evm.TU.scaffold_63.221
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|297569299|ref|YP_003690643.1| | 3.00E-42 | chaperone DnaJ domain protein [Desulfurivibrio alkaliphilus AHT2] |
| KOG | KOG0714 | 1.00E-171 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|743771451|ref|XP_010916015.1| | 0 | PREDICTED: dnaJ homolog subfamily B member 13-like [Elaeis guineensis] |
| Swissprot | tr|Q9LZK5|DNJ19_ARATH | 3.00E-44 | DnaJ protein ERDJ3B (Precursor) |
| trEMBL | tr|M0TQV6|M0TQV6_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P16030_001} |
| TAIR | AT2G20560 | 1.00E-171 | DNAJ heat shock family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000062 | 4713806 | 4741301 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015019
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 4 | 67 | 7.30E-27 |
| PF01556.17 | DnaJ_C | 168 | 326 | 6.00E-40 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006457 | Biological Process | protein folding |
| GO:0051082 | Molecular Function | unfolded protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.760 |
| SRR2545915 | Juvenile tuber | 20.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 46.480 |
| SRR5643514 | five period of Gastrodia elata | 38.230 | |
| SRR5643515 | five period of Gastrodia elata | 40.330 | |
| SRR5643524 | five period of Gastrodia elata | 38.030 | |
| SRR5643525 | five period of Gastrodia elata | 36.520 | |
| SRR5643528 | five period of Gastrodia elata | 26.380 | |
| SRR5643658 | five period of Gastrodia elata | 27.510 | |
| SRR5643659 | five period of Gastrodia elata | 49.420 | |
| SRR5643660 | five period of Gastrodia elata | 52.690 | |
| SRR5643661 | five period of Gastrodia elata | 57.040 | |
| SRR5643662 | five period of Gastrodia elata | 52.210 | |
| SRR5643663 | five period of Gastrodia elata | 42.360 | |
| SRR5643664 | five period of Gastrodia elata | 52.780 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 33.670 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 29.970 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.850 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.250 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.400 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 31.590 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 29.340 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 41.360 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 41.360 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 46.85 |
| Juven | Juvenile tuber | 50.37 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 28.56 | |
| Mother_Juven | Mother tuber of Juvenile | 26.81 |