Detail information of GWHGAAEX015047/evm.TU.scaffold_64.31
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|297566201|ref|YP_003685173.1| | 3.00E-151 | amidase [Meiothermus silvanus DSM 9946] |
| nr | gi|596161135|ref|XP_007222929.1| | 0 | hypothetical protein PRUPE_ppa005238mg [Prunus persica] |
| Swissprot | tr|Q8VXY9|UAH_ARATH | 0 | Ureidoglycolate hydrolase (Precursor) |
| trEMBL | tr|M5XRF1|M5XRF1_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ24128.1} |
| TAIR | AT5G43600 | 0 | ureidoglycolate amidohydrolase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000067 | 796899 | 864648 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015047
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01546.27 | Peptidase_M20 | 134 | 468 | 1.60E-27 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K18151 | UAH | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Purine metabolism | map00230 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0016813 | Molecular Function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.650 |
| SRR2545915 | Juvenile tuber | 9.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.360 |
| SRR5643514 | five period of Gastrodia elata | 14.800 | |
| SRR5643515 | five period of Gastrodia elata | 12.050 | |
| SRR5643524 | five period of Gastrodia elata | 12.140 | |
| SRR5643525 | five period of Gastrodia elata | 16.690 | |
| SRR5643528 | five period of Gastrodia elata | 17.860 | |
| SRR5643658 | five period of Gastrodia elata | 18.750 | |
| SRR5643659 | five period of Gastrodia elata | 8.920 | |
| SRR5643660 | five period of Gastrodia elata | 8.720 | |
| SRR5643661 | five period of Gastrodia elata | 8.800 | |
| SRR5643662 | five period of Gastrodia elata | 8.510 | |
| SRR5643663 | five period of Gastrodia elata | 9.120 | |
| SRR5643664 | five period of Gastrodia elata | 7.530 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.060 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.920 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.200 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.300 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.290 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.410 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.400 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.390 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.390 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.90 |
| Juven | Juvenile tuber | 7.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.25 | |
| Mother_Juven | Mother tuber of Juvenile | 8.41 |