Detail information of GWHGAAEX015048/evm.TU.scaffold_64.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389877831|ref|YP_006371396.1|6.00E-55NADH dehydrogenase I subunit E [Tistrella mobilis KA081020-065]
KOGKOG31961.00E-138NADH:ubiquinone oxidoreductase, NDUFV2/24 kD subunit
nrgi|720094298|ref|XP_010246318.1|4.48E-158PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like [Nelumbo nucifera]
Swissprottr|O22769|NDUV2_ARATH2.00E-147NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (Precursor)
trEMBLtr|W1NUY9|W1NUY9_AMBTC2.00E-157Uncharacterized protein {ECO:0000313|EMBL:ERN01447.1}
TAIRAT4G025801.00E-138NADH-ubiquinone oxidoreductase 24 kDa subunit, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000067866595920002+
Transcript Sequence

Network for GWHGAAEX015048

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01257.182Fe-2S_thioredx622187.40E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03943NDUFV2 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms393.660
SRR2545915Juvenile tuber277.750
SRP108465SRR5643513five period of Gastrodia elata139.050
SRR5643514five period of Gastrodia elata157.140
SRR5643515five period of Gastrodia elata141.740
SRR5643524five period of Gastrodia elata145.670
SRR5643525five period of Gastrodia elata231.880
SRR5643528five period of Gastrodia elata177.600
SRR5643658five period of Gastrodia elata188.540
SRR5643659five period of Gastrodia elata223.120
SRR5643660five period of Gastrodia elata498.740
SRR5643661five period of Gastrodia elata411.460
SRR5643662five period of Gastrodia elata532.470
SRR5643663five period of Gastrodia elata427.860
SRR5643664five period of Gastrodia elata597.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1261.330
SRR6049655Rhizomagastrodiae_C368-T10_good_1186.210
SRR6049656Rhizomagastrodiae_C368-T07_good_1227.220
SRR6049657Rhizomagastrodiae_C368-T07_good_1325.030
SRR6049658Rhizomagastrodiae_C368-T04_good_1380.880
SRR6049659Rhizomagastrodiae_C368-T04_good_1419.470
SRR6049660Rhizomagastrodiae_C368-T01_good_1316.120
SRR6049661Rhizomagastrodiae_C368-T04_good_1336.870
SRR6049662Rhizomagastrodiae_C368-T01_good_1226.780
SRR6049663Rhizomagastrodiae_C368-T01_good_1306.520
SRR6049664Rhizomagastrodiae_C368-T10_good_1210.440
SRR6049665Rhizomagastrodiae_C368-T10_good_1210.440
SRP279888GastroGastrodia elata tuber 427.68
JuvenJuvenile tuber117.19
Mother_GastroMother tuber of Gastrodia elata 94.19
Mother_JuvenMother tuber of Juvenile 80.71