Gene detail

Detail information of GWHGAAEX015059/evm.TU.scaffold_64.48

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|186686091\|ref\|YP_001869287.1\|	6.00E-16	hypothetical protein Npun_F6055 [Nostoc punctiforme PCC 73102]
KOG	KOG2861	3.00E-143	Uncharacterized conserved protein
nr	gi\|743760805\|ref\|XP_010938932.1\|	0	PREDICTED: uncharacterized protein LOC105057908 isoform X1 [Elaeis guineensis]
trEMBL	tr\|I1HRW9\|I1HRW9_BRADI	9.00E-159	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI2G50770.1}
TAIR	AT1G69380	3.00E-143	Protein of unknown function (DUF155)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	1119806	1157532	+

Transcript Sequence
>GWHTAAEX015059 ATACGAGTTGACACGGCCCTGGAAAATCCATACGTTCCGGATCCGTCGATTCACCCACGGTTCAGTGGGTTTACCCGGTTCGATTTGACACGGCCCTGGTGGACTCTTCCTTTCTCAACTTGCCTCGCCACCCGAGGTACCCAGCGAGAGAGGGTAGGAGGGAATGGGGAGGTGGAGAACTTGGCCTCAACTCAAGCAATTGACTGCGCCGTTGCGGCCTCATTTATCTCCTTCACCATTTATTCCGTCATCTCTCGAACGTCATTCTCTCCTTCAAGCTATCTGTTCTTCCTCTTCCCCTCTTAGGTTCTTGTCAACAATCCCAGCCGTTTCCGATTCATATGGCGGGGGTTTTGACGCTAGCCGTCACGAGTACATGCAGAGGAATATGTGGAATTTGCTGGAAGATGAAGGCACCTCCAGATATATTCCGGTGAAGGCCTATTTCCTAAGCACAAGCATTGATCTGAAGGGAATACAGACTGAAAATATTTGCTATGCTGTTCCTCCGTCTTCTCGTTCATCAAACTATGTTGCACTGCGTTACTCAGATTACCCTCTAGATATTGGGATAAATGAGAATGGTGATAATTGTCGCTATGTTGTCGTTTTCCAATATGGATCCGCTGTTTTGTTCAATATTGCAGATCATGAAGCTGAACAATATCTTGATATAGTTAGGAAGCATGCTCATGGATTGCTTCCTGAGATGAGAAAAGATGATTATGCTGTGGTCAAGAAACCACAATTGACATCCTGGATGCATGGAGGTGCTGATTTTATTGCGTTAAAAAGTTTGGACATGGATGGAATTCGTATAATTTGTAATGTGCTTGGACAAAGTATTGCTCTCGATCATTTCATTGACCAGGTTGATGATATGGTTGAAGAATTTACAGACATCAATCGTGGTATGGAAAAGACTGGAACCTTTACTATGAAAAGAAAGAAGCTTTTTCAACTGGTTGGGAAGGCAAACTCAAACTTAGCTGATGTAATCTTAAAGCTTGGTTTATTTGATAGGTCTGAGATTGCTTGGAAAAATGCAAACTACGCCCAAATATTGGAATATCTTCGTGAAGAGTACGAACTTTCTCAACGTTTTGGAAGCTTAAACTTCAAACTCAAATTTGTGGAGCACAACATACATTTCCTTCAGGAAGTTCTTCAAAACAAGAGATCTGATCTTCTGGAATGGGTCATCATCGTGCTGTTACTTATTGAAAACGTTATCGCAGTGTATGAGATTCTTAAAACTTCGACGACAATTCCTCCTCCTTAAAATTCACTTATTTATAAAATCTGTTCAGTTCTGCTCTTGCATGCCTGATCTTAGTCAAGCCAGATGTCCAGAGCTTGCTGTGTAATATAGGCATTATCTCATGGCTTCCACTTAACATTTGTTGATATGTTTTAGATAAATATCTTAGGCACCTGTAGAATTTATTTTTTATTTTTCTACTTTTTTTTCTTTATGAGGAGTATATAGATAAACTTTCAAAAGCTGCAAAAGGGCTCGATTTTCAGTATATAACATGACATTATAACTGTGCCAACGCAGTTACATTATTTGACTTTTATATTTTTTCTAGTGTTCAAAATATTCATATATACAACAAGATATATGACCTTGAGCTGTTATGTATATATTTTTCTTAGAGACCCTATGCTT

Network for GWHGAAEX015059

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02582.13	DUF155	147	318	1.10E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.330
SRP064423	SRR2545915	Juvenile tuber	4.260
SRP108465	SRR5643513	five period of Gastrodia elata	4.150
	SRR5643514	five period of Gastrodia elata	4.910
	SRR5643515	five period of Gastrodia elata	4.140
	SRR5643524	five period of Gastrodia elata	4.690
	SRR5643525	five period of Gastrodia elata	4.050
	SRR5643528	five period of Gastrodia elata	4.480
	SRR5643658	five period of Gastrodia elata	3.600
	SRR5643659	five period of Gastrodia elata	3.990
	SRR5643660	five period of Gastrodia elata	4.900
	SRR5643661	five period of Gastrodia elata	5.080
	SRR5643662	five period of Gastrodia elata	5.200
	SRR5643663	five period of Gastrodia elata	3.980
	SRR5643664	five period of Gastrodia elata	4.030
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.250
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.900
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.880
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.760
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.410
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.790
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.440
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.200
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.080
SRP279888	Gastro	Gastrodia elata tuber	8.72
	Juven	Juvenile tuber	11.42
	Mother_Gastro	Mother tuber of Gastrodia elata	8.53
	Mother_Juven	Mother tuber of Juvenile	11.29