Detail information of GWHGAAEX015064/evm.TU.scaffold_64.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719966369|ref|XP_010258724.1|1.61E-146PREDICTED: probable WRKY transcription factor 4 [Nelumbo nucifera]
Swissprottr|Q9XI90|WRKY4_ARATH6.00E-117Probable WRKY transcription factor 4
trEMBLtr|W1PFV6|W1PFV6_AMBTC7.00E-143Uncharacterized protein {ECO:0000313|EMBL:ERN06521.1}
TAIRAT1G139602.00E-116WRKY DNA-binding protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006712455721254270+
Transcript Sequence

Network for GWHGAAEX015064

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1972535.20E-25
PF03106.14WRKY3714282.60E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.770
SRR2545915Juvenile tuber3.010
SRP108465SRR5643513five period of Gastrodia elata17.360
SRR5643514five period of Gastrodia elata27.110
SRR5643515five period of Gastrodia elata20.500
SRR5643524five period of Gastrodia elata22.290
SRR5643525five period of Gastrodia elata3.580
SRR5643528five period of Gastrodia elata7.770
SRR5643658five period of Gastrodia elata3.740
SRR5643659five period of Gastrodia elata2.660
SRR5643660five period of Gastrodia elata2.480
SRR5643661five period of Gastrodia elata3.010
SRR5643662five period of Gastrodia elata2.030
SRR5643663five period of Gastrodia elata1.720
SRR5643664five period of Gastrodia elata2.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.720
SRR6049655Rhizomagastrodiae_C368-T10_good_144.560
SRR6049656Rhizomagastrodiae_C368-T07_good_127.670
SRR6049657Rhizomagastrodiae_C368-T07_good_118.960
SRR6049658Rhizomagastrodiae_C368-T04_good_118.760
SRR6049659Rhizomagastrodiae_C368-T04_good_116.760
SRR6049660Rhizomagastrodiae_C368-T01_good_118.600
SRR6049661Rhizomagastrodiae_C368-T04_good_115.070
SRR6049662Rhizomagastrodiae_C368-T01_good_129.370
SRR6049663Rhizomagastrodiae_C368-T01_good_127.430
SRR6049664Rhizomagastrodiae_C368-T10_good_150.690
SRR6049665Rhizomagastrodiae_C368-T10_good_150.690
SRP279888GastroGastrodia elata tuber 4.59
JuvenJuvenile tuber6.83
Mother_GastroMother tuber of Gastrodia elata 22.07
Mother_JuvenMother tuber of Juvenile 10.92