Gene detail

Detail information of GWHGAAEX015065/evm.TU.scaffold_64.55

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|397691265\|ref\|YP_006528519.1\|	1.00E-21	serine/threonine protein kinase with PASTA sensor(s) [Melioribacter roseus P3M-2]
KOG	KOG0600	0	Cdc2-related protein kinase
nr	gi\|743847299\|ref\|XP_010939059.1\|	0	PREDICTED: probable serine/threonine-protein kinase At1g54610 [Elaeis guineensis]
Swissprot	tr\|F4I114\|Y1960_ARATH	2.00E-168	Probable serine/threonine-protein kinase At1g09600
trEMBL	tr\|M0T9W2\|M0T9W2_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P24660_001}
TAIR	AT1G18670	0	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	1278429	1296807	+

Transcript Sequence
>GWHTAAEX015065 TCTCTCTCTCTCTCTCTCTCATAGCAACCCGAGCAATCCCGTCCATTCCATCAGTTCCGTTGTAATCTTCCTTTGAAGAATATTCCTTCGTAATCTGCCTCCACTTTCAGCTGTCATCCGGGGATTTTCAGGAATTTTATCCGACAATCTGATGCAATTGCTTTTAATCCACAATGGGCTGCGCGGCTTCGAAAAAGGCGGGGATTATGACTCCGGCAGAATCTTCTGGGGTCTCAGGCAGTATGGAAGGTTCCGGTGGGGTTTTGAGTTCGGCATTGTGGAGTAAGATTGAGGTTGATCAGTGCGAGTCAGGGGAGTCTGCGAAAATCAGTTCTAATGGCACGGATTCGCAGAGTTTCTGTCTGAGGAATTTCAACAAACAGGTTGAGGGTGAGCAGGTGGCGGCAGGCTGGCCTGCCTGGCTGAGCTTGGTGGCTAGGGAGGCGATTCAGGGATGGATTCCGCTTAAACCCGAGGCCTTCGAGAAGCTCGAGAAGATTGGTAACGGAACCTATAGCAGTGTGTTCAAAGCACGCGAACTCGAAACTGGAAAGTTTGTTGCTCTGAAAAAGATCAGGTTCGACATTTTTGAACCAGAGAGTGTGAGATTCATGGCACGAGAAATATTCATCCTTCGCAGGCTTAGCCATCGAAACATTACGAAGCTAGAGGGCTTGATCACTTCCAGACTATCAAGCAGTATATATCTTGTATTTGAATATATGGAGCATGATCTTGCAGGACTATCTTCTTCTCCTGACATCAGATTTTCTGAATCTCAGGTGAAATGCTACATGCAGCAGCTACTGTCTGGTCTTGAACACTGCCACTCTCGAGGCATTATTCATAGAGATATTAAGAGTGCAAATCTTCTTGTTAACAATGAGGGCATTCTAAAAATTGCTGATTTTGGCTTATCGAACTTCTTTAATCCCTCATTTAGGCAGCAACTTACGAGCCGTGTTGTAACTCTTTGGTATCGCCCGCCTGAACTCCTATTGGGTGCGACAAAATATGAACCAACTATAGATATGTGGAGTGTAGGTTGTGTGTTTGCGGAGCTCTTCCTTAAAAAGCCGGTCTTGCAAGGAAAGACAGAGGTTGAGCAGATACACAAGATATTTAAGCTTTGTGGCTCGCCTTCTGATGAATATTGGAGGAGGTCTAGGCTACCTAATGAGATACTTTTTAAACCCCAACAAACTTATGAAAGCTGCCTTCAGGAGACATTTGGCTGGTTACCTAAAAATACTTACGAATTGATGGAAACATTCCTCTCCATTGAACCGCAAGAACGTGGCACAGCTACTTCTGCTCTTTCATCTGATTATTTCAGAACAATTCCTTATGCATGTGACCCATCAAGTTTGCCCAACTATCCTCCCAACAAGGAGATTGATGCAAAAAATCGTGAGGAATTACTCAGAAGAAAGTTGAGGAGTGCAATGCAACCATTGGAACTTGCAGGAAGACATTCAAGGTCAACCAGATCACTAAAATCAAATGTATCGAGTAAATTATCACGCTTAGAGGAGCCATGGTTGAAAGCAGAATCCGCACATAAAAATACAGGAAGACAAAATTTGGCTAGAGTGAATGATGAAGCTGGACTATTTGCAGTTATGCAGCAGAAAAATTGCCTTCTGCCTTCTGATGTTTCAAGTGGCTTCATATGGGCGGAGACACAGAGAGATGGCCAGGGTTCTGTCCGATCACATAGTAAATCCAGCTCAAATCATGATATTCAGGGGGTGCTGAATTCATCAGGTGTTCTTCAGTCAAGACATTTTTGTGATCCCATTATTCATTCAAAAGAAGATGGTATTGGATTCTGCGCACATTCTAGAGACGAAAAGCCTTACGAAATTGAAAAGAACTTGATGGTGCATCAATGGGTGCAACTCGGGCATCCAGATTTTGACAATCAGTCTATTAATTCAACTGATATGAGTTGCAATATTGATTCGTTATCTTCCAAACCAGGTTATATGGGTTATAAAAAGCCAGAAGATCGTGTTGAGTTCTCAGCACCACTGCTGTTTCAGTCAGGCAAGGTAGATGAACTCTTGGAAAAGCATGAACATCAAATGCGCCAAGCAGTTCGGCAAAAATCCTTCCAAAAAGATATACTTATCTGAAGCAGCGTTAGCCTGAAAATTTCCCCTGGGATGGAAAAAAATACAGAAGCAGTGCGCGTGCGACATTTGGTTCGTGGGATCGTCGCTTGTTTGTACATAAAAATAATAAAATTAATATTATACAAAAACGGTAAATGTGTTTTTTTTAATTTAATTTGAATTAAGATGTATTTTATTGTAAAGCTTATGAAAAAAATTAATTTGATAAAGTGAAGGGGATATGATCGTAATTTTACCTTTATAATTTTTTTCATAGATTTTACTTTTGGATTATTTGTTTGGAATTA

Network for GWHGAAEX015065

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	103	387	7.60E-67

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_CDK-CRK7-CDK9

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.110
SRP064423	SRR2545915	Juvenile tuber	7.160
SRP108465	SRR5643513	five period of Gastrodia elata	6.830
	SRR5643514	five period of Gastrodia elata	7.130
	SRR5643515	five period of Gastrodia elata	6.050
	SRR5643524	five period of Gastrodia elata	5.760
	SRR5643525	five period of Gastrodia elata	1.640
	SRR5643528	five period of Gastrodia elata	1.030
	SRR5643658	five period of Gastrodia elata	0.600
	SRR5643659	five period of Gastrodia elata	7.060
	SRR5643660	five period of Gastrodia elata	6.450
	SRR5643661	five period of Gastrodia elata	8.830
	SRR5643662	five period of Gastrodia elata	4.660
	SRR5643663	five period of Gastrodia elata	4.100
	SRR5643664	five period of Gastrodia elata	4.730
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.280
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.640
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.920
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.350
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.990
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.640
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.170
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.950
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.090
SRP279888	Gastro	Gastrodia elata tuber	7.36
	Juven	Juvenile tuber	9.03
	Mother_Gastro	Mother tuber of Gastrodia elata	7.92
	Mother_Juven	Mother tuber of Juvenile	7.59