Detail information of GWHGAAEX015068/evm.TU.scaffold_64.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|567877259|ref|XP_006431219.1|6.86E-67hypothetical protein CICLE_v10013796mg [Citrus clementina]
Swissprottr|Q6J9S1|RA211_ARATH1.00E-31Ethylene-responsive transcription factor RAP2-11
trEMBLtr|V4UXE6|V4UXE6_9ROSI3.00E-67Uncharacterized protein {ECO:0000313|EMBL:ESR44459.1}
TAIRAT5G197904.00E-31related to AP2 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006714245851425775-
Transcript Sequence

Network for GWHGAAEX015068

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP232817.10E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.210
SRR2545915Juvenile tuber0.080
SRP108465SRR5643513five period of Gastrodia elata35.420
SRR5643514five period of Gastrodia elata58.310
SRR5643515five period of Gastrodia elata29.780
SRR5643524five period of Gastrodia elata50.480
SRR5643525five period of Gastrodia elata0.350
SRR5643528five period of Gastrodia elata1.170
SRR5643658five period of Gastrodia elata1.380
SRR5643659five period of Gastrodia elata1.480
SRR5643660five period of Gastrodia elata1.090
SRR5643661five period of Gastrodia elata0.850
SRR5643662five period of Gastrodia elata1.290
SRR5643663five period of Gastrodia elata0.690
SRR5643664five period of Gastrodia elata0.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.430
SRR6049655Rhizomagastrodiae_C368-T10_good_172.960
SRR6049656Rhizomagastrodiae_C368-T07_good_152.600
SRR6049657Rhizomagastrodiae_C368-T07_good_119.580
SRR6049658Rhizomagastrodiae_C368-T04_good_137.290
SRR6049659Rhizomagastrodiae_C368-T04_good_137.880
SRR6049660Rhizomagastrodiae_C368-T01_good_125.600
SRR6049661Rhizomagastrodiae_C368-T04_good_121.010
SRR6049662Rhizomagastrodiae_C368-T01_good_162.450
SRR6049663Rhizomagastrodiae_C368-T01_good_172.440
SRR6049664Rhizomagastrodiae_C368-T10_good_197.560
SRR6049665Rhizomagastrodiae_C368-T10_good_197.560
SRP279888GastroGastrodia elata tuber 0.43
JuvenJuvenile tuber4.96
Mother_GastroMother tuber of Gastrodia elata 9.17
Mother_JuvenMother tuber of Juvenile 7.06