Detail information of GWHGAAEX015080/evm.TU.scaffold_64.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|11499046|ref|NP_070280.1|6.00E-102thermosome subunit beta [Archaeoglobus fulgidus DSM 4304]
KOGKOG03590Chaperonin complex component, TCP-1 zeta subunit (CCT6)
nrgi|694997860|ref|XP_009401572.1|0PREDICTED: T-complex protein 1 subunit zeta-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M888|TCPZA_ARATH0T-complex protein 1 subunit zeta 1 {ECO:0000303|PubMed:11599560}
trEMBLtr|M0RZX9|M0RZX9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P14710_001}
TAIRAT3G025300TCP-1/cpn60 chaperonin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006716218891650019+
Transcript Sequence

Network for GWHGAAEX015080

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00118.23Cpn60_TCP1295281.20E-166
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding
GO:0005524Molecular FunctionATP binding
GO:0051082Molecular Functionunfolded protein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms189.660
SRR2545915Juvenile tuber191.020
SRP108465SRR5643513five period of Gastrodia elata93.320
SRR5643514five period of Gastrodia elata91.140
SRR5643515five period of Gastrodia elata89.200
SRR5643524five period of Gastrodia elata90.070
SRR5643525five period of Gastrodia elata41.550
SRR5643528five period of Gastrodia elata58.950
SRR5643658five period of Gastrodia elata44.070
SRR5643659five period of Gastrodia elata177.010
SRR5643660five period of Gastrodia elata193.410
SRR5643661five period of Gastrodia elata186.540
SRR5643662five period of Gastrodia elata209.400
SRR5643663five period of Gastrodia elata194.770
SRR5643664five period of Gastrodia elata202.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1130.670
SRR6049655Rhizomagastrodiae_C368-T10_good_1108.810
SRR6049656Rhizomagastrodiae_C368-T07_good_1127.800
SRR6049657Rhizomagastrodiae_C368-T07_good_1134.340
SRR6049658Rhizomagastrodiae_C368-T04_good_1130.220
SRR6049659Rhizomagastrodiae_C368-T04_good_1136.290
SRR6049660Rhizomagastrodiae_C368-T01_good_1132.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1133.600
SRR6049662Rhizomagastrodiae_C368-T01_good_1143.570
SRR6049663Rhizomagastrodiae_C368-T01_good_1147.870
SRR6049664Rhizomagastrodiae_C368-T10_good_1129.880
SRR6049665Rhizomagastrodiae_C368-T10_good_1129.880
SRP279888GastroGastrodia elata tuber 224.85
JuvenJuvenile tuber196.21
Mother_GastroMother tuber of Gastrodia elata 67.63
Mother_JuvenMother tuber of Juvenile 127.69