Gene detail

Detail information of GWHGAAEX015081/evm.TU.scaffold_64.75

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|288942517\|ref\|YP_003444757.1\|	1.00E-22	alpha-L-glutamate ligase [Allochromatium vinosum DSM 180]
nr	gi\|743760928\|ref\|XP_010939642.1\|	0	PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.8 [Elaeis guineensis]
Swissprot	tr\|Q0D4Z6\|GH38_ORYSJ	0	Probable indole-3-acetic acid-amido synthetase GH3.8
trEMBL	tr\|A0A0A0L698\|A0A0A0L698_CUCSA	0	Uncharacterized protein {ECO:0000313\|EMBL:KGN57485.1}
TAIR	AT2G14960	0	Auxin-responsive GH3 family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	1650657	1653914	-

Transcript Sequence
>GWHTAAEX015081 CAATGTCATATTTTATAATTTATCATGTTGTATTTCCCACGATAAATAGCCTCCCGCCCAATTCAATTCCTGCCAAGGGTCGGAGTCCGGAGCATACAGAGCGGAGGATAAAAATGGCGGCAAAGGTTGCGTGGTCGTCGGAGCGGTTGGGTCCGGCGGCTTGCGAGAGCGACGCCAGGAAGCTGGAGTTCATAGAGGAGATGACGGCGAACGCCGCGGAGGTGCAGCAGAGGGTCCTCTCCGAGATACTGTCGCGGAACGCGGGAGCGGAGTATCTCCGGCGGCACGCAATTGGCGGCGGCGCCGTCGATCTGAAATCTTTCAAGGAGCGGCTTCCCGTCGTCGCCTACGAGGATCTCAAACCCGACATACAGCGCATCGCCGACGGCGACCGCTCCCCCATCCTCTCCGCCGTCCCCGTCTCCGAATTCCTCACCAGCTCGGGGACGTCTGCGGGTGAGAGAAAGCTGATGCCTACAATACCTGAAGAGATGGAGCGAAGGCAGCTTCTCTACAGCTTGCTAATGCCTGTGATGAACATCTACGTTCCTGGCCTTGACAAAGGCAAGGCCCTCTACTTCCTCTTTGTCAAGCCCGAAACAAGAACGCCGGGCGGGCTCGTGGCCCGCCCGGTGCTCACGAGCTACTACAACAGCGACCACTTCAAGTGCCGCCCATTCGACCCCTACAACGTCTACACGAGCCCGGCCGCCGCCATCCTCTGCACGGACTCACACCAAAGCATGTACTCGCAAATGCTCTTCGGGCTCCTCCAACGCCATGACGTTCTCCGCGTCGGCGCCGTATTCGCCTCGGGACTCCTACGCGCCCTCCACTTCCTCCAGCTCCATTGGCGCTCCCTCGCCACCGACATCTCCACCGGCACACTCTCCCTCGACCACGTCTCCGACCCCTCTGTCCGTTCCGCCGTCACCGCCTTCCTCAAACCTGACCCCGCCCTCGCCGACCATATAGCCCGCGAGTGCGGATCGAGCGATTGGTCCGGAATCGTCACCCGAATTTGGCCCAACACAAAGTACCTCGACGTCATCGTCACTGGGGCCATGGCCCAGTACATACCCACTCTCGAGTATTACAGCGGCGGGTTGCCGATGGCGTGCACAATGTACGCGTCGTCCGAATGCTATTTTGGGCTAAATCTCAAACCCATGTGCCCACCCGACGAGGTCTCGTACACGATCATGCCCAATATGGGATTCTTCGAGTTCGTTCCGTGCGACGCCGGCCAGTCTCCGTCAACTGTGGATCTAACAGATGTGGAGAAAGGGAAGGAGTACGAGCTCGTAGTCACAACCTATGCCGGGTTGTATCGGTATCGGGTCGGCGATATTCTTCGGGTCACCGGGTTTCATAATGCAGCCCCCATGTTCAGATTTGTGCGACGGAAGAACGTGCTGCTGAGCATCGAGTCAGACAAGACGGATGAGTCGGAGCTACAGGCGGCGGTGGAACGAGCTTCTGCGGTGATCGGGCCAATTGGAGCAAGTGTGGTGGAGTACACTAGCCAGGCCTATACAAATGAAATTCCCGGGCATTACGTGATATATTGGGAGCTAATGATGAAAACTAAAGATGAGGGGAAAAAAATGCCTGGAGAAGAAATGATGGAGAAATGCTGTTTGGAGATGGAGGAGGCATTGAATGCAGTGTATAGGCAGAGTCGGGTCAATGACAAGTCAATCGGGCCGCTAGAGATTCGGGTTGTGCGACCCGGAACATTCGAGGAGCTCATGGACTTTGCCATCTCCAAGGGGGCTTCCATCAATCAATACAAGGTTGCTAGGTGTGTCACCTTTCGACCCATTATCGAGTTGTTGGATTCGCGGGTCTTATCAGCTCATTTTAGCCCAAAGCCACCAACTTGGACTCCGCATGGCAATACTAGCACCACAACAACCTAGGCCAAGGACTATGCAGTGGATAGAGAGGTGCTTTATAATGTCTTGTGATGTAACTTGGGGGTGGAGCTTGGAGTGCATTGAGAGGAGACTTGGGGTGGAGCTTGGGACGCATCTCAATAAGCTTCTTAAGCATTAACCTAAAGGATAAATACCCTTGTGAATAAATCATTGATATAGTATTTATTACACATTGAATAGCATCAATAGAGATGATATTGCTACTTTTAATTTATTTGAGATTAGTCAATTTTATTACAACTTATGATCTAATCTCATTACAAATTTGATAATTATTTTTTCATTCCAAATCAAATTTAAATAAAGTGCATTTGACCGGCTGTTAAAA

Network for GWHGAAEX015081

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03321.12	GH3	64	605	9.00E-201

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14487	GH3	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.420
SRP064423	SRR2545915	Juvenile tuber	6.800
SRP108465	SRR5643513	five period of Gastrodia elata	9.960
	SRR5643514	five period of Gastrodia elata	17.100
	SRR5643515	five period of Gastrodia elata	6.860
	SRR5643524	five period of Gastrodia elata	23.180
	SRR5643525	five period of Gastrodia elata	8.240
	SRR5643528	five period of Gastrodia elata	6.940
	SRR5643658	five period of Gastrodia elata	0.440
	SRR5643659	five period of Gastrodia elata	3.700
	SRR5643660	five period of Gastrodia elata	3.350
	SRR5643661	five period of Gastrodia elata	4.440
	SRR5643662	five period of Gastrodia elata	1.160
	SRR5643663	five period of Gastrodia elata	0.890
	SRR5643664	five period of Gastrodia elata	1.530
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	53.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	69.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	56.610
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	75.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	81.760
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	104.570
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	61.960
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	70.960
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	33.530
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	30.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	43.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	43.340
SRP279888	Gastro	Gastrodia elata tuber	1.88
	Juven	Juvenile tuber	28.74
	Mother_Gastro	Mother tuber of Gastrodia elata	386.74
	Mother_Juven	Mother tuber of Juvenile	74.82