Detail information of GWHGAAEX015083/evm.TU.scaffold_64.77
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427701621|ref|YP_007044843.1| | 1.00E-92 | oxidoreductase NAD-binding domain-containing protein [Cyanobium gracile PCC 6307] |
| KOG | KOG1158 | 0 | NADP/FAD dependent oxidoreductase |
| nr | gi|115470583|ref|NP_001058890.1| | 0 | Os07g0147900 [Oryza sativa Japonica Group] |
| Swissprot | tr|O23877|FENR3_ORYSJ | 0 | Ferredoxin--NADP reductase, embryo isozyme, chloroplastic (Precursor) |
| trEMBL | tr|Q0D8L9|Q0D8L9_ORYSJ | 0 | Ferredoxin--NADP reductase {ECO:0000256|RuleBase:RU004465} |
| TAIR | AT4G05390 | 0 | root FNR 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000067 | 1676334 | 1685809 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015083
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00175.20 | NAD_binding_1 | 199 | 313 | 2.40E-26 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02641 | petH | Metabolic pathways | map01100 |
| Photosynthesis | map00195 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.640 |
| SRR2545915 | Juvenile tuber | 19.580 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 26.970 |
| SRR5643514 | five period of Gastrodia elata | 26.760 | |
| SRR5643515 | five period of Gastrodia elata | 24.110 | |
| SRR5643524 | five period of Gastrodia elata | 26.190 | |
| SRR5643525 | five period of Gastrodia elata | 36.590 | |
| SRR5643528 | five period of Gastrodia elata | 30.850 | |
| SRR5643658 | five period of Gastrodia elata | 43.230 | |
| SRR5643659 | five period of Gastrodia elata | 32.830 | |
| SRR5643660 | five period of Gastrodia elata | 27.060 | |
| SRR5643661 | five period of Gastrodia elata | 28.660 | |
| SRR5643662 | five period of Gastrodia elata | 31.110 | |
| SRR5643663 | five period of Gastrodia elata | 32.310 | |
| SRR5643664 | five period of Gastrodia elata | 28.800 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.790 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 27.230 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.880 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.500 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.400 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.930 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 26.86 |
| Juven | Juvenile tuber | 22.01 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.93 | |
| Mother_Juven | Mother tuber of Juvenile | 11.38 |