Detail information of GWHGAAEX015091/evm.TU.scaffold_64.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428225706|ref|YP_007109803.1|0zeta-carotene desaturase [Geitlerinema sp. PCC 7407]
KOGKOG00290Amine oxidase
nrgi|614102992|sp|C3VEQ0.1|ZDS_ONCHC0RecName: Full=Zeta-carotene desaturase, chloroplastic/chromoplastic; Short=OgZDS; AltName: Full=9,9'-di-cis-zeta-carotene desaturase; AltName: Full=Carotene 7,8-desaturase; Flags: Precursor [Oncidium hybrid cultivar]
Swissprottr|C3VEQ0|ZDS_ONCHC0Zeta-carotene desaturase, chloroplastic/chromoplastic (Precursor)
trEMBLtr|I0AXV3|I0AXV3_NARTA0Zeta-carotene desaturase {ECO:0000313|EMBL:AFH53817.1}
TAIRAT3G048700zeta-carotene desaturase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006718896511934054-
Transcript Sequence

Network for GWHGAAEX015091

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01593.23Amino_oxidase705345.60E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00514ZDS, crtQ Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016117Biological Processcarotenoid biosynthetic process
GO:0016491Molecular Functionoxidoreductase activity
GO:0016719Molecular Functioncarotene 7,8-desaturase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.720
SRR2545915Juvenile tuber29.330
SRP108465SRR5643513five period of Gastrodia elata34.460
SRR5643514five period of Gastrodia elata44.870
SRR5643515five period of Gastrodia elata35.180
SRR5643524five period of Gastrodia elata40.320
SRR5643525five period of Gastrodia elata43.620
SRR5643528five period of Gastrodia elata38.790
SRR5643658five period of Gastrodia elata47.720
SRR5643659five period of Gastrodia elata26.580
SRR5643660five period of Gastrodia elata23.610
SRR5643661five period of Gastrodia elata22.720
SRR5643662five period of Gastrodia elata30.120
SRR5643663five period of Gastrodia elata34.440
SRR5643664five period of Gastrodia elata29.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.880
SRR6049655Rhizomagastrodiae_C368-T10_good_121.710
SRR6049656Rhizomagastrodiae_C368-T07_good_133.630
SRR6049657Rhizomagastrodiae_C368-T07_good_132.050
SRR6049658Rhizomagastrodiae_C368-T04_good_128.970
SRR6049659Rhizomagastrodiae_C368-T04_good_128.380
SRR6049660Rhizomagastrodiae_C368-T01_good_130.070
SRR6049661Rhizomagastrodiae_C368-T04_good_130.220
SRR6049662Rhizomagastrodiae_C368-T01_good_130.970
SRR6049663Rhizomagastrodiae_C368-T01_good_133.470
SRR6049664Rhizomagastrodiae_C368-T10_good_129.330
SRR6049665Rhizomagastrodiae_C368-T10_good_129.330
SRP279888GastroGastrodia elata tuber 30.65
JuvenJuvenile tuber28.58
Mother_GastroMother tuber of Gastrodia elata 20.54
Mother_JuvenMother tuber of Juvenile 20.98