Detail information of GWHGAAEX015113/evm.TU.scaffold_64.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08597.00E-130Synaptobrevin/VAMP-like protein
nrgi|720077747|ref|XP_010241141.1|3.72E-142PREDICTED: putative vesicle-associated membrane protein 726 [Nelumbo nucifera]
Swissprottr|Q9MAS5|VA726_ARATH2.00E-130Putative vesicle-associated membrane protein 726
trEMBLtr|M1BSH7|M1BSH7_SOLTU1.00E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400051941}
TAIRAT1G047607.00E-130vesicle-associated membrane protein 726

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006722080882214035-
Transcript Sequence

Network for GWHGAAEX015113

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13774.5Longin321112.40E-23
PF00957.20Synaptobrevin1292159.20E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016192Biological Processvesicle-mediated transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.230
SRR2545915Juvenile tuber20.070
SRP108465SRR5643513five period of Gastrodia elata33.570
SRR5643514five period of Gastrodia elata41.500
SRR5643515five period of Gastrodia elata34.750
SRR5643524five period of Gastrodia elata41.230
SRR5643525five period of Gastrodia elata60.990
SRR5643528five period of Gastrodia elata74.750
SRR5643658five period of Gastrodia elata75.340
SRR5643659five period of Gastrodia elata24.250
SRR5643660five period of Gastrodia elata20.010
SRR5643661five period of Gastrodia elata25.250
SRR5643662five period of Gastrodia elata31.490
SRR5643663five period of Gastrodia elata21.180
SRR5643664five period of Gastrodia elata26.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.750
SRR6049655Rhizomagastrodiae_C368-T10_good_133.240
SRR6049656Rhizomagastrodiae_C368-T07_good_133.530
SRR6049657Rhizomagastrodiae_C368-T07_good_122.390
SRR6049658Rhizomagastrodiae_C368-T04_good_130.650
SRR6049659Rhizomagastrodiae_C368-T04_good_130.430
SRR6049660Rhizomagastrodiae_C368-T01_good_126.940
SRR6049661Rhizomagastrodiae_C368-T04_good_128.260
SRR6049662Rhizomagastrodiae_C368-T01_good_130.710
SRR6049663Rhizomagastrodiae_C368-T01_good_128.790
SRR6049664Rhizomagastrodiae_C368-T10_good_136.520
SRR6049665Rhizomagastrodiae_C368-T10_good_136.520
SRP279888GastroGastrodia elata tuber 22.55
JuvenJuvenile tuber26.20
Mother_GastroMother tuber of Gastrodia elata 48.17
Mother_JuvenMother tuber of Juvenile 23.04