Gene detail

Detail information of GWHGAAEX015115/evm.TU.scaffold_64.108

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0799	Branching enzyme
nr	gi\|695044292\|ref\|XP_009409889.1\|	PREDICTED: xylosyltransferase 1-like [Musa acuminata subsp. malaccensis]
trEMBL	tr\|F6HV72\|F6HV72_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB58590.1}
TAIR	AT5G15050	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	2282547	2286910	-

Transcript Sequence
>GWHTAAEX015115 GCCAAATACATGAACTTAACTTTGGGAATTCTGCTCACCTAACTCAAATTTTCTACACAGAATATGGAAAATCCAACTAATGCATTAACAAATCGTAACCCACCCCAATTTTCCAAACTCCATTTTCTTTCTCTTTTCGTTCATCAGATCCCAAACCCCTAACTGCAATCTTCTTGCCCTATTTAATAATCCTCTTGAATTAATCCCAGCATCCAGGATCGAAAAAAATAAAAAATAAAACTCCGTTCTCCCATTAATCTCCCAAAAAAAGCAGAACGTCGGTAGCTCATCTCTGCAGATCGAGAGCCCCGAAGAGGAAAAAGCGCAAAAGATGAAATCTTTATCGTCTTCCGACCAGATTACTTTCACAAAACCTTCTTCCGCCCTTTAAGAACTCTGATCTGCATACATTGCAGGCCGAAAGATGAAATCTTTGAACTCGTTCTACCTTCGCCCTCCAGCTATAGACCGCAAATGGATCTTTCCTCTGGCCGTGGGCTCCTTCTTCTCTCTCATCCTCCTCCTCTTCTTCACAACCCTTTCTTCCCCTGAAACCCCCTTTGCTCTTCTCCCTTTCTCTTTCCTCTCCCCCGCCTCCTCTTCCTTCTACTCTCCCTCCTTCGTCGAATCAAAGCTTCAATCCTTCTCCTCTTCTCCTTCTTCTTCGCCTCTTCCATTTCCTCCTCGCCTTGCTTACCTCATATCAGGCTCAGCCGGGGACGGCTCCATGCTCAAGCGGACGCTCCAAGCGCTCTACCATCCTCTGAACCGCTACGTGGTTCACCTTGACTTGGCCGCATCACCTGAGGAGAGGGCGGACCTTAGAGAATTCGTGGCCGGACATCCAGTCTTCAAGGAGCTCGGCAATGTCAGGATGATCACAAAAGCTAATCTTGTGACATACCGTGGGCCCACAATGGTTGCCAATACCCTCCATGCCGCCGCTATCTTGCTCAGATATGGCGGAGATTGGGACTGGTTTATCAATCTGAGCGCATCGGATTACCCTCTTGTAACGCAGGATGATCTGCTGCATGCTCTTTCCTATCTGCCGCGAGATCTGAATTTTATTGATCATACGAGTAATATAGGGTGGAAGGAGTTTCAGAGGGCAAAGCCAATAATTATTGACCCTGGACTGTATATGTCTAAGAAGCAGGATGTATTCTGGATACCCCAGAGGAGAAGTGTGCCTACTGCCTTCAGACTTTTTACAGGATCCGCCTGGATGGTGCTCTCTCGCTCTTTCATCGACTACTGCATATGGGGATGGGACAATCTCCCTCGCACCGTCCTCATGTACTATGCCAACTTCCTTTCATCGCCCGAAGGCTACTTCCACACAGTGATTTGCAATGCTAAAGAGTTCACTAACACTACTGTCAATCATGACCTACACTTTATATCATGGGACAACCCCCCTAAGCAACACCCACATTACCTCAACTCGAAAGACATGAAGGCTATGATTGATAGCAATGCGCCCTTTGCGAGGAAGTTCAAAAGGGATGATCCTGTTCTCGACAGGATAGATGCCGAGCTCTTGTTCCGTGGCCCCGAAAGGCTTGTTCCTGGGGGATGGTGTGTGGGGAGAAGGGATAATGGGAGTGATCCTTGCCTTATCAATGGAAATGCCTCGGTTTTACGGCCTGGCCATGGTGCTTTCAGGTTGCAGCAGCTTATGGAGAAGCTCTTGTCAGAGAAAAACTTCAGGCCAAGGCAGTGCAAGTGAGGATTTTGACTAAAAACCATAGCTTGCATCCACAGTCACGGTTCCGAATCAGTTTGTAAGGCTGGCTGACTGATGCTGAATTCGCTGCGGAAACAAAGGATATATACGTCTTAGATTTTTTTTTTTGTTTAGATTAATGACAATGAAAGGACGGTGCTTATCATTCTCTGTATAGGCACTGTTTCAAGATGACTGCATGAGTTAGGAAATTAGGGAGTTTCTGATAACATGTGCAGATTTTGTGACCAGAGACCTGCATTGCTTGGTATAATAAATACTTGTTTATACTCTTCAAGTCAGTGAACTGCTTATTATGGCAGAGGGCTTCTCCTGTGTAATACATATCAATAAAGTGTTCAATAGCTGCTATATAATACTCAATTGAAAGCTGGATTTTTATATGTGACTGCTATGTTTTCTCTCTAAGAACTGATATATGTGTAAACTTAATGTTGATTTAGATTGAGCAGGATTTAGTGTTAAAATGTCTTTAATGTGATCTGTCACCTCAGTATTGAGCAAAATATTAGGACTTGAATTGCCAAAAGGCTGAA

Network for GWHGAAEX015115

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module5

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02485.20	Branch	89	348	4.70E-73

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT14
Carbohydrate-Active enzymes Family	GT14

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008375	Molecular Function	acetylglucosaminyltransferase activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.810
SRP064423	SRR2545915	Juvenile tuber	12.810
SRP108465	SRR5643513	five period of Gastrodia elata	46.140
	SRR5643514	five period of Gastrodia elata	45.390
	SRR5643515	five period of Gastrodia elata	56.450
	SRR5643524	five period of Gastrodia elata	55.700
	SRR5643525	five period of Gastrodia elata	21.240
	SRR5643528	five period of Gastrodia elata	34.620
	SRR5643658	five period of Gastrodia elata	18.180
	SRR5643659	five period of Gastrodia elata	25.240
	SRR5643660	five period of Gastrodia elata	22.510
	SRR5643661	five period of Gastrodia elata	28.490
	SRR5643662	five period of Gastrodia elata	55.210
	SRR5643663	five period of Gastrodia elata	32.970
	SRR5643664	five period of Gastrodia elata	12.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.820
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	26.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.850
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.390
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.600
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	53.230
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	47.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	27.480
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	27.480
SRP279888	Gastro	Gastrodia elata tuber	18.03
	Juven	Juvenile tuber	12.71
	Mother_Gastro	Mother tuber of Gastrodia elata	43.50
	Mother_Juven	Mother tuber of Juvenile	23.97