Detail information of GWHGAAEX015119/evm.TU.scaffold_64.113
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2754 | 0 | Oligosaccharyltransferase, beta subunit |
| nr | gi|672125426|ref|XP_008786131.1| | 0 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [Phoenix dactylifera] |
| Swissprot | tr|Q6ZLK0|OST48_ORYSJ | 0 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (Precursor) |
| trEMBL | tr|I1LQ57|I1LQ57_SOYBN | 0 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit {ECO:0000256|RuleBase:RU361142} |
| TAIR | AT5G66680 | 0 | dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000067 | 2500505 | 2514230 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015119
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03345.13 | DDOST_48kD | 32 | 435 | 1.40E-127 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K12670 | WBP1 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 | ||
| Various types of N-glycan biosynthesis | map00513 | ||
| Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0018279 | Biological Process | protein N-linked glycosylation via asparagine |
| GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 161.860 |
| SRR2545915 | Juvenile tuber | 165.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 128.150 |
| SRR5643514 | five period of Gastrodia elata | 127.710 | |
| SRR5643515 | five period of Gastrodia elata | 123.470 | |
| SRR5643524 | five period of Gastrodia elata | 130.340 | |
| SRR5643525 | five period of Gastrodia elata | 130.330 | |
| SRR5643528 | five period of Gastrodia elata | 137.200 | |
| SRR5643658 | five period of Gastrodia elata | 108.900 | |
| SRR5643659 | five period of Gastrodia elata | 153.440 | |
| SRR5643660 | five period of Gastrodia elata | 157.900 | |
| SRR5643661 | five period of Gastrodia elata | 166.800 | |
| SRR5643662 | five period of Gastrodia elata | 165.410 | |
| SRR5643663 | five period of Gastrodia elata | 165.790 | |
| SRR5643664 | five period of Gastrodia elata | 175.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 141.760 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 193.940 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 146.050 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 124.650 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 134.140 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 134.190 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 122.060 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 128.520 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 149.900 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 139.100 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 168.580 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 168.580 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 166.61 |
| Juven | Juvenile tuber | 127.96 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 113.81 | |
| Mother_Juven | Mother tuber of Juvenile | 116.12 |