Detail information of GWHGAAEX015123/evm.TU.scaffold_64.117
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|134098662|ref|YP_001104323.1| | 9.00E-21 | serine/threonine protein kinase [Saccharopolyspora erythraea NRRL 2338] |
| nr | gi|183579821|emb|CAK32637.1| | 0 | putative symbiosis receptor-like kinase [Papaver rhoeas] |
| Swissprot | tr|Q8L4H4|NORK_MEDTR | 0 | Nodulation receptor kinase (Precursor) |
| trEMBL | tr|B2FDL8|B2FDL8_9MAGN | 0 | Putative symbiosis receptor-like kinase {ECO:0000313|EMBL:CAK32637.1} |
| TAIR | AT1G67730_1 | 3.00E-131 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000067 | 2560288 | 2587426 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015123
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12819.6 | Malectin_like | 29 | 346 | 1.50E-53 |
| PF07714.16 | Pkinase_Tyr | 568 | 836 | 4.00E-41 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-I-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 113.520 |
| SRR2545915 | Juvenile tuber | 112.570 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 90.760 |
| SRR5643514 | five period of Gastrodia elata | 105.290 | |
| SRR5643515 | five period of Gastrodia elata | 95.930 | |
| SRR5643524 | five period of Gastrodia elata | 119.630 | |
| SRR5643525 | five period of Gastrodia elata | 104.810 | |
| SRR5643528 | five period of Gastrodia elata | 116.850 | |
| SRR5643658 | five period of Gastrodia elata | 104.080 | |
| SRR5643659 | five period of Gastrodia elata | 84.330 | |
| SRR5643660 | five period of Gastrodia elata | 84.630 | |
| SRR5643661 | five period of Gastrodia elata | 87.080 | |
| SRR5643662 | five period of Gastrodia elata | 72.960 | |
| SRR5643663 | five period of Gastrodia elata | 87.700 | |
| SRR5643664 | five period of Gastrodia elata | 76.540 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 82.890 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 85.030 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 88.770 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 83.330 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 81.520 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 93.050 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 85.730 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 82.420 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 98.220 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 101.550 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 92.930 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 92.930 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 68.87 |
| Juven | Juvenile tuber | 80.04 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 100.05 | |
| Mother_Juven | Mother tuber of Juvenile | 94.77 |