Detail information of GWHGAAEX015142/evm.TU.scaffold_64.135


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|182415905|ref|YP_001820971.1|4.00E-98bile acid:sodium symporter [Opitutus terrae PB90-1]
KOGKOG27182.00E-151Na+-bile acid cotransporter
nrgi|743758831|ref|XP_010929025.1|8.43E-175PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Elaeis guineensis]
Swissprottr|Q7XVB3|BASS1_ORYSJ3.00E-159Probable sodium/metabolite cotransporter BASS1, chloroplastic (Precursor)
trEMBLtr|M0RY50|M0RY50_MUSAM5.00E-174Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P08420_001}
TAIRAT1G785602.00E-151Sodium Bile acid symporter family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006729620062978096-
Transcript Sequence

Network for GWHGAAEX015142

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01758.15SBF1383161.20E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.610
SRR2545915Juvenile tuber21.640
SRP108465SRR5643513five period of Gastrodia elata29.230
SRR5643514five period of Gastrodia elata30.510
SRR5643515five period of Gastrodia elata26.080
SRR5643524five period of Gastrodia elata29.460
SRR5643525five period of Gastrodia elata17.300
SRR5643528five period of Gastrodia elata19.520
SRR5643658five period of Gastrodia elata24.110
SRR5643659five period of Gastrodia elata26.130
SRR5643660five period of Gastrodia elata23.500
SRR5643661five period of Gastrodia elata27.170
SRR5643662five period of Gastrodia elata23.470
SRR5643663five period of Gastrodia elata23.180
SRR5643664five period of Gastrodia elata21.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.740
SRR6049655Rhizomagastrodiae_C368-T10_good_134.330
SRR6049656Rhizomagastrodiae_C368-T07_good_128.420
SRR6049657Rhizomagastrodiae_C368-T07_good_122.870
SRR6049658Rhizomagastrodiae_C368-T04_good_115.100
SRR6049659Rhizomagastrodiae_C368-T04_good_113.260
SRR6049660Rhizomagastrodiae_C368-T01_good_117.810
SRR6049661Rhizomagastrodiae_C368-T04_good_119.280
SRR6049662Rhizomagastrodiae_C368-T01_good_126.140
SRR6049663Rhizomagastrodiae_C368-T01_good_124.620
SRR6049664Rhizomagastrodiae_C368-T10_good_138.290
SRR6049665Rhizomagastrodiae_C368-T10_good_138.290
SRP279888GastroGastrodia elata tuber 24.70
JuvenJuvenile tuber24.51
Mother_GastroMother tuber of Gastrodia elata 20.60
Mother_JuvenMother tuber of Juvenile 17.69