Gene detail

Detail information of GWHGAAEX015143/evm.TU.scaffold_64.137

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0758	1.00E-102	Mitochondrial carnitine-acylcarnitine carrier protein
nr	gi\|695020297\|ref\|XP_009397194.1\|	6.71E-152	PREDICTED: mitochondrial arginine transporter BAC1 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q84UC7\|BAC1_ARATH	3.00E-130	Mitochondrial arginine transporter BAC1
trEMBL	tr\|M0SU94\|M0SU94_MUSAM	3.00E-152	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P33320_001}
TAIR	AT2G33820	1.00E-102	Mitochondrial substrate carrier family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	2990211	3034632	+

Transcript Sequence
>GWHTAAEX015143 TACTTTTTTTGTTTGAAGCGTTACCTGCGTACTTTTTTTGTTTGAAGCGTTACCTGCGCACTTTCATATAAGACCACGCTGATATTCATTGAAAAACACTAAAGCGTCTGCGCATGTTGATACCGAAGCACAGATCCAAAAGCGCCTGGGAAGCCTTCACGATCGTAACTTGCGGCGGTGCAAGAGGAGATGGTCTCCGGTGATGCTGCCAAAGAGTATGCGGCCGGATTTGCTGCCGGCATTGCGACGGTCATCACTGGTCATCCCTTCGACACGGTCAAGGTGAAGTTGCAAGCTCACAACACTAAAACACAACTGAAGGAGTATCGCAATGCTTTACAGTGTACTGGAAGAATAATAAGCACTGAAGGAGTTAAGGGACTCTATAGAGGCGCATCATCTTCCTTCATTGGGATGGCACTTGAGGGCTCCCTTTTTTTTGGCAATTACTCCCTAACAAAGCAGTTTTTGCAGGGAGAATCCCACAACAGCAAGCCACAGCTTCAGGTGATTATACCTTCCGGTGCCTTTGCTGGAGCAATAATCAGCTTGATACTCTGTCCTGCAGAACTGGTTAAGTGTAGAATGCAAGTTCAGGGAAAGGATTCTGCTCCGTCCAGCCACACCAGATACAATGGCCCTCTGGACTGCGTACGCAAAACCATAAAGAATGAAGGGATCCAAGGCATGTTTCGCGGCGGGCTCGCAACTCTGTTAAGAGAGTCAATTGGAAATGCTGTCTTTTTCGCTGCTTACGAGACTAGCAAATATTACCTCCATTCTCGAGTGTATCATGCCCAGGCTGGATCTTTGGCTTACTTGCAAGATGTGGGAATCGGCATTATAACTGGAGGAATATCCGGAATGGCTTTCTGGGCCGCCATTCTTCCATTCGATGTTGCAAAAACTTTGATTCAGACGGCACCCAACACGGGATCTAGCCGCAATCCCATGCACACATTATGCTCGATATATAGTCGGTTTGGCCTTCGAGGATGCTATGCGGGGCTTGGGCCAACGTTGGCAAGAGCATTTCCGGCAAATGCTGCTGCTATTGTTACTCTGGAACTTGCTTCAAAGATTCTCGGCATCACAAGAGGCTGATATTCGGGCCCCAATGGTTGTGGGTGAATTTTTGGGTGCTTTTACCCTTTTGTTTTTTTAGGGTGTTGGTTAGAATTATTAGACATGTGGCGGTTTGTCATTGGCTGTGATGGGCTAAAACGTTGTTTGCATTGAATGTTTGCATCATTTGAATCTTTACGAGTAAACGAACTAGTAAAAGAAGAGCCCTTAGTAGTCGGCATTTTACCCTGTCTGAAATTTAATTCACTACTGCTGTGAATGCTGTGTTTATCACTGATTAGATGGCTGTTGATATAAAATCATTGATCTTTGTCATCATTAATCTATAGCTTATCAATCAATATGATGCATTTCTTATATCAATAGTCATATTTGCCACAATAGGCTGTGTTTCTCATGACCCCCACAGTAACTTTCAGCTATGAAGAGTTCATTTTCACTCTGTGCTTATGGATCACATTCTATGTTGTGTTCTGTCATGTTGGCT

Network for GWHGAAEX015143

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.26	Mito_carr	6	96	4.30E-21
PF00153.26	Mito_carr	111	197	5.10E-22
PF00153.26	Mito_carr	218	299	1.20E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15109	SLC25A20_29, CACT, CACL, CRC1	Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.260
SRP064423	SRR2545915	Juvenile tuber	2.140
SRP108465	SRR5643513	five period of Gastrodia elata	9.440
	SRR5643514	five period of Gastrodia elata	10.730
	SRR5643515	five period of Gastrodia elata	8.410
	SRR5643524	five period of Gastrodia elata	12.040
	SRR5643525	five period of Gastrodia elata	4.810
	SRR5643528	five period of Gastrodia elata	5.810
	SRR5643658	five period of Gastrodia elata	4.690
	SRR5643659	five period of Gastrodia elata	6.110
	SRR5643660	five period of Gastrodia elata	5.590
	SRR5643661	five period of Gastrodia elata	7.050
	SRR5643662	five period of Gastrodia elata	8.070
	SRR5643663	five period of Gastrodia elata	6.790
	SRR5643664	five period of Gastrodia elata	6.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.850
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.180
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.370
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.270
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.270
SRP279888	Gastro	Gastrodia elata tuber	8.73
	Juven	Juvenile tuber	8.74
	Mother_Gastro	Mother tuber of Gastrodia elata	11.95
	Mother_Juven	Mother tuber of Juvenile	8.52