Detail information of GWHGAAEX015146/evm.TU.scaffold_64.140


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672194294|ref|XP_008776254.1|4.05E-43PREDICTED: auxin-repressed 12.5 kDa protein [Phoenix dactylifera]
Swissprottr|Q05349|12KD_FRAAN3.00E-35Auxin-repressed 12.5 kDa protein
trEMBLtr|M5WI12|M5WI12_PRUPE4.00E-42Uncharacterized protein {ECO:0000313|EMBL:EMJ13447.1}
TAIRAT2G338302.00E-36Dormancy/auxin associated family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006730399793041910-
Transcript Sequence

Network for GWHGAAEX015146

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05564.11Auxin_repressed71165.30E-41
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2167.920
SRR2545915Juvenile tuber1654.220
SRP108465SRR5643513five period of Gastrodia elata1274.460
SRR5643514five period of Gastrodia elata1359.550
SRR5643515five period of Gastrodia elata1586.230
SRR5643524five period of Gastrodia elata1495.290
SRR5643525five period of Gastrodia elata2440.280
SRR5643528five period of Gastrodia elata1088.430
SRR5643658five period of Gastrodia elata2621.030
SRR5643659five period of Gastrodia elata1731.640
SRR5643660five period of Gastrodia elata2569.710
SRR5643661five period of Gastrodia elata1718.070
SRR5643662five period of Gastrodia elata1799.390
SRR5643663five period of Gastrodia elata2043.710
SRR5643664five period of Gastrodia elata3218.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1787.450
SRR6049655Rhizomagastrodiae_C368-T10_good_1454.150
SRR6049656Rhizomagastrodiae_C368-T07_good_1477.150
SRR6049657Rhizomagastrodiae_C368-T07_good_11047.410
SRR6049658Rhizomagastrodiae_C368-T04_good_1733.790
SRR6049659Rhizomagastrodiae_C368-T04_good_1907.920
SRR6049660Rhizomagastrodiae_C368-T01_good_1686.050
SRR6049661Rhizomagastrodiae_C368-T04_good_1542.700
SRR6049662Rhizomagastrodiae_C368-T01_good_1186.390
SRR6049663Rhizomagastrodiae_C368-T01_good_1366.840
SRR6049664Rhizomagastrodiae_C368-T10_good_1275.510
SRR6049665Rhizomagastrodiae_C368-T10_good_1275.510
SRP279888GastroGastrodia elata tuber 4,313.16
JuvenJuvenile tuber3,923.88
Mother_GastroMother tuber of Gastrodia elata 3,387.71
Mother_JuvenMother tuber of Juvenile 4,146.10