Gene detail

Detail information of GWHGAAEX015149/evm.TU.scaffold_64.143

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|384198099\|ref\|YP_005583842.1\|	1.00E-31	putative serine/threonine protein kinase [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]
KOG	KOG0201	0	Serine/threonine protein kinase
nr	gi\|743864147\|ref\|XP_010943962.1\|	0	PREDICTED: serine/threonine-protein kinase 3/4-like isoform X1 [Elaeis guineensis]
Swissprot	tr\|O23304\|BLUS1_ARATH	7.00E-56	Serine/threonine-protein kinase BLUS1
trEMBL	tr\|M0SRH7\|M0SRH7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P23660_001}
TAIR	AT3G15220	0	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	3068793	3108936	-

Transcript Sequence
>GWHTAAEX015149 AGATTTTTCAATCGTCTCTTTCTTGGCCGAGGCAGCTAAAAACCCTCGTACCCCCGTTTCTCATCCATTTCAATTTAGGATGACTATCTGCTGCATCTCGTCGCAATTGATCCGTTTTTTCAGCGACTTAAGGGTTTAAACGACAGTTGGAGTGCGAAGGTTTCCGCCGTCGGAATCAAATAAAATGGAATTTGTGGCAATGGCTATGCCCTAAATTCAAATTCTGAGCGACTTCAAGTGGGGCTTTTTTTCGTCACCTTAAGATTTTGAAAAACGATGTCGGATTCGTCAGCCTTGATCGCTGCCATCCAGTCCAGGTTCAGCAATTTGGAACTGATCGGGAAAGGCTCTTTTGGCGATGTTTTCAAAGGTTTTGATAAGGAGCTCAATAAGGAAGTTGCCATCAAGGTTATTGATCTGGAAGAAGCAGAGGATGATATTGAAGACATTCAAAAGGAAATTTCAGTTTTGTCACAGTGCCGTTCTCCATACATAACTGACTACTATGGTTCATATCTCCATCAAACCAAACTATGGATAGTGATGGAGTATATGGCTGGTGGTTCTGTTGCTGACTTGCTTCAAACTGGTCCTCCACTGGATGAATTGTCAATAGCATGCATTTTGCGAGACTTGCTGCATGCAATTGAATATCTTCACAGTGAAGGAAAAATTCACAGAGATATCAAAGCTGCAAATATTTTGTTGACAGAAAATGGTGATGTTAAGGTGGCAGACTTTGGCGTTTCTGCCCAGTTAACGAAGACAATTTCTAGGAGGAAGACTTTTGTTGGAACCCCATTTTGGATGGCTCCTGAGGTTATTCAGAATTCTGAAGGATATAATGAAAAGGCAGATATCTGGTCTTTAGGTATCACTGCTATAGAAATTGCAAAAGGAGAGCCACCTTTGGCCGATATGCATCCAATGAGAGTTCTATTTATGATACCACGGGAAAATCCGCCTCAGTTGGATGAACATTTTTCTCGACCTTTAAAAGAATTTGTTTCATTATGTTTGAAGAAAGCACCTAATGAGAGACCCAGCGCTAGGGAGCTCCTCAAGCATCGTTTCATTAAGATTGCTCGAAAAAGTCCAAAGCTACTTGAAAGGATAAGGGAGCGACCGAAGCTTATTCCTAATGATGGGCTGGGTTCTCAGAAAAATGGCCCCATTCAATATGATGAAGGTACTGGCACTGTCAAGGCGGTCAGAGAAACAAGAGATGAAACAGCACGATCAAGTCAAGGGAGAGTTTCAAGGGGCATTGGTGGGGATTTTGGCAAGGATTTATTACAGGGTACAGGAACTGTCAAAACAGTCAGATATTCAAAAGATGAAACTGTACAACAAAGTTATCAAAAAGGTCCAAAGAGCATTGGCTGGGAATCCAACATGGATATACAACAGGGTACAGGAACTGTTCGCAGTTTTTCAAAACCTCTTTTGGATTCCATGGTTGGAGAGAAGAGATCTGAGGTTCCATATGCACCTCATTTGTCGAGACAAGTAGCAGACAAAGAGAAACAAAAGGCACTATCATCAATAAATGCATTTGATGAACAAAATGCCGAGAAATTATCCGTTAAGGATGAACTGAAAGACAAAATACGAGAAAATTCTGTGGATTATCAACCAGTGGATGGATTTGGAACTGTTGTGGTTCGATCTCCAAGAGCAAGTCAAATGCATTCAACAATGAATCATTTGAGTTCCAAGCCTTTGAGCAGATATGGTTCTGTTGAAGAGGCTTCTATAAGCGGTACTGTTGTTCTTCGCACTCATCATGATGGAACTGACACCTCATCTTTGGGTTTAAAACCTAGGTTGGGAATTCAAGAGAAAAGTTCAGCTTCACCACCTGAAGATAGTGCAACTAACCTTGCAGAGGCTAAGGCTGCTTTGCAAGCAGGGGCAAAAAAAGGAAGTTCTAGACCTGTAGCTCGGTCTTCCAGAGATTCTTCTGAAAACTCTGATGTACAAAAAGCATCTTCTAAATTACGCCATAGTGATAGTGATGGAAGTTCTCAGGCCTCTGCTGCAGTAGCCTCTCCTACATTGTCATCACTGATTATTCCTTCATTGAAAGAGGCTGCTGGCGATAGATTAGAAGGATCAATTTCTCGTGCTGCAATCGAAGCACTCATCGACTTAGAGCTGCAAAAACCCGGCGTTTCCGAAGCTCTCATGTGCAGATTGCTTCAGCGACTAGGAAGTTCTAAAGATGCGTCTATGAAAAATCTTCAAGATCTCGCCGGCCGGATATTTCTGAAGCATGGCGAAGCCGCGCAGGATCCGACGGAGGGAAGGACGAAACCGAACGCCCAACACCTTGCGGACGGTGCGGGCGTCAGTCCGCTCGCGGAGTTTCTATTGGCAAGGTGGCTAAATCAAACTGAGCATGAACAGGACAATTCTTTTTAGTTAGCAATGCTGCTTGGCTTCTCTTTTTCTTTATTATTATCTTATGTTTGCATCTTGGATATTTTATTAATTATGAGCGGTGTACATATCAATCATATGGTAGTTTGATTTATTTAATGTTTATTTATGAACAAATATAAATCTGAACTTTATAGAATTTACAAAAAGAATGCTCCATTCCTTAAATTTATCCCATCCTTGTGTAAAAAAGTTTGGATCTTCAGCTTAAGACTGTATCGGCCCTCACAGTTTGTTGCTCA

Network for GWHGAAEX015149

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	16	267	4.20E-68

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE20-YSK

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.590
SRP064423	SRR2545915	Juvenile tuber	29.940
SRP108465	SRR5643513	five period of Gastrodia elata	14.360
	SRR5643514	five period of Gastrodia elata	14.820
	SRR5643515	five period of Gastrodia elata	14.400
	SRR5643524	five period of Gastrodia elata	15.870
	SRR5643525	five period of Gastrodia elata	16.720
	SRR5643528	five period of Gastrodia elata	16.080
	SRR5643658	five period of Gastrodia elata	19.720
	SRR5643659	five period of Gastrodia elata	18.090
	SRR5643660	five period of Gastrodia elata	19.280
	SRR5643661	five period of Gastrodia elata	16.840
	SRR5643662	five period of Gastrodia elata	19.140
	SRR5643663	five period of Gastrodia elata	18.860
	SRR5643664	five period of Gastrodia elata	19.940
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.240
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.670
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	23.440
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	21.310
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.690
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.660
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.660
SRP279888	Gastro	Gastrodia elata tuber	22.46
	Juven	Juvenile tuber	20.25
	Mother_Gastro	Mother tuber of Gastrodia elata	24.76
	Mother_Juven	Mother tuber of Juvenile	27.58