Detail information of GWHGAAEX015151/evm.TU.scaffold_64.145
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|343085920|ref|YP_004775215.1| | 2.00E-40 | RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745] |
| nr | gi|743758896|ref|XP_010929346.1| | 0 | PREDICTED: phytosulfokine receptor 2 [Elaeis guineensis] |
| Swissprot | tr|Q9FN37|PSKR2_ARATH | 0 | Phytosulfokine receptor 2 (Precursor) |
| trEMBL | tr|B9SQH2|B9SQH2_RICCO | 0 | Phytosulfokine receptor, putative {ECO:0000313|EMBL:EEF34126.1} |
| TAIR | AT5G53890 | 0 | phytosylfokine-alpha receptor 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000067 | 3121342 | 3125435 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015151
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08263.11 | LRRNT_2 | 36 | 69 | 3.90E-05 |
| PF00560.32 | LRR_1 | 100 | 121 | 0.88 |
| PF13855.5 | LRR_8 | 462 | 516 | 1.60E-07 |
| PF13855.5 | LRR_8 | 571 | 630 | 1.30E-09 |
| PF00069.24 | Pkinase | 762 | 1029 | 3.80E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-Xb-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.480 |
| SRR2545915 | Juvenile tuber | 1.180 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.620 |
| SRR5643514 | five period of Gastrodia elata | 1.380 | |
| SRR5643515 | five period of Gastrodia elata | 0.840 | |
| SRR5643524 | five period of Gastrodia elata | 1.050 | |
| SRR5643525 | five period of Gastrodia elata | 0.650 | |
| SRR5643528 | five period of Gastrodia elata | 0.860 | |
| SRR5643658 | five period of Gastrodia elata | 0.860 | |
| SRR5643659 | five period of Gastrodia elata | 0.420 | |
| SRR5643660 | five period of Gastrodia elata | 0.360 | |
| SRR5643661 | five period of Gastrodia elata | 0.620 | |
| SRR5643662 | five period of Gastrodia elata | 1.100 | |
| SRR5643663 | five period of Gastrodia elata | 1.280 | |
| SRR5643664 | five period of Gastrodia elata | 0.670 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.120 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.750 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.520 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.960 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.680 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.730 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.030 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.930 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.770 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.550 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.550 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.42 |
| Juven | Juvenile tuber | 0.49 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.99 | |
| Mother_Juven | Mother tuber of Juvenile | 1.91 |