Detail information of GWHGAAEX015156/evm.TU.scaffold_64.152


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|1.00E-06serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06983.00E-51Serine/threonine protein phosphatase
nrgi|414884989|tpg|DAA61003.1|5.84E-60TPA: putative protein phosphatase 2C family protein [Zea mays]
Swissprottr|Q0J2R1|P2C67_ORYSJ3.00E-59Probable protein phosphatase 2C 67
trEMBLtr|A0A096S310|A0A096S310_MAIZE2.00E-60Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G126832_P01}
TAIRAT1G180303.00E-51Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006733751523376349-
Transcript Sequence

Network for GWHGAAEX015156

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C41072.00E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.230
SRR2545915Juvenile tuber9.640
SRP108465SRR5643513five period of Gastrodia elata15.770
SRR5643514five period of Gastrodia elata17.010
SRR5643515five period of Gastrodia elata12.230
SRR5643524five period of Gastrodia elata19.180
SRR5643525five period of Gastrodia elata18.710
SRR5643528five period of Gastrodia elata30.500
SRR5643658five period of Gastrodia elata24.320
SRR5643659five period of Gastrodia elata18.840
SRR5643660five period of Gastrodia elata16.740
SRR5643661five period of Gastrodia elata16.680
SRR5643662five period of Gastrodia elata13.240
SRR5643663five period of Gastrodia elata15.450
SRR5643664five period of Gastrodia elata17.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.680
SRR6049655Rhizomagastrodiae_C368-T10_good_111.280
SRR6049656Rhizomagastrodiae_C368-T07_good_120.290
SRR6049657Rhizomagastrodiae_C368-T07_good_115.490
SRR6049658Rhizomagastrodiae_C368-T04_good_129.870
SRR6049659Rhizomagastrodiae_C368-T04_good_124.480
SRR6049660Rhizomagastrodiae_C368-T01_good_128.970
SRR6049661Rhizomagastrodiae_C368-T04_good_131.760
SRR6049662Rhizomagastrodiae_C368-T01_good_113.170
SRR6049663Rhizomagastrodiae_C368-T01_good_120.720
SRR6049664Rhizomagastrodiae_C368-T10_good_117.450
SRR6049665Rhizomagastrodiae_C368-T10_good_117.450
SRP279888GastroGastrodia elata tuber 20.60
JuvenJuvenile tuber18.56
Mother_GastroMother tuber of Gastrodia elata 27.11
Mother_JuvenMother tuber of Juvenile 21.07