Detail information of GWHGAAEX015162/evm.TU.scaffold_64.158


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|379011283|ref|YP_005269095.1|3.00E-10molybdopterin biosynthesis protein MoeB [Acetobacterium woodii DSM 1030]
KOGKOG20160NEDD8-activating complex, APP-BP1/UBA5 component
nrgi|672176730|ref|XP_008808438.1|0PREDICTED: NEDD8-activating enzyme E1 regulatory subunit [Phoenix dactylifera]
Swissprottr|P42744|ULA1_ARATH0NEDD8-activating enzyme E1 regulatory subunit {ECO:0000305}
trEMBLtr|M0SV15|M0SV15_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P02360_001}
TAIRAT1G051800NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006734553013482113-
Transcript Sequence

Network for GWHGAAEX015162

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00899.20ThiF95072.60E-22
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyThiF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045116Biological Processprotein neddylation
GO:0019781Molecular FunctionNEDD8 activating enzyme activity
GO:0008641Molecular Functionsmall protein activating enzyme activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.940
SRR2545915Juvenile tuber35.740
SRP108465SRR5643513five period of Gastrodia elata19.590
SRR5643514five period of Gastrodia elata21.090
SRR5643515five period of Gastrodia elata20.570
SRR5643524five period of Gastrodia elata21.160
SRR5643525five period of Gastrodia elata22.620
SRR5643528five period of Gastrodia elata25.460
SRR5643658five period of Gastrodia elata23.210
SRR5643659five period of Gastrodia elata25.360
SRR5643660five period of Gastrodia elata26.570
SRR5643661five period of Gastrodia elata26.580
SRR5643662five period of Gastrodia elata30.000
SRR5643663five period of Gastrodia elata27.090
SRR5643664five period of Gastrodia elata29.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.510
SRR6049655Rhizomagastrodiae_C368-T10_good_123.190
SRR6049656Rhizomagastrodiae_C368-T07_good_125.320
SRR6049657Rhizomagastrodiae_C368-T07_good_120.860
SRR6049658Rhizomagastrodiae_C368-T04_good_121.620
SRR6049659Rhizomagastrodiae_C368-T04_good_118.410
SRR6049660Rhizomagastrodiae_C368-T01_good_120.310
SRR6049661Rhizomagastrodiae_C368-T04_good_121.750
SRR6049662Rhizomagastrodiae_C368-T01_good_127.130
SRR6049663Rhizomagastrodiae_C368-T01_good_123.630
SRR6049664Rhizomagastrodiae_C368-T10_good_126.460
SRR6049665Rhizomagastrodiae_C368-T10_good_126.460
SRP279888GastroGastrodia elata tuber 31.57
JuvenJuvenile tuber23.33
Mother_GastroMother tuber of Gastrodia elata 20.08
Mother_JuvenMother tuber of Juvenile 22.85