Detail information of GWHGAAEX015164/evm.TU.scaffold_64.160


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|148910435|gb|ABR18293.1|3.67E-19unknown [Picea sitchensis]
Swissprottr|O22059|CPC_ARATH3.00E-14Transcription factor CPC
trEMBLtr|B8LRL3|B8LRL3_PICSI1.00E-19Putative uncharacterized protein {ECO:0000313|EMBL:ABR18293.1}
TAIRAT2G464109.00E-14Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006735163933517684+
Transcript Sequence

Network for GWHGAAEX015164

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding26675.20E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.770
SRR2545915Juvenile tuber18.720
SRP108465SRR5643513five period of Gastrodia elata14.600
SRR5643514five period of Gastrodia elata4.990
SRR5643515five period of Gastrodia elata28.340
SRR5643524five period of Gastrodia elata11.870
SRR5643525five period of Gastrodia elata4.650
SRR5643528five period of Gastrodia elata0.080
SRR5643658five period of Gastrodia elata2.630
SRR5643659five period of Gastrodia elata39.680
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata29.650
SRR5643662five period of Gastrodia elata30.000
SRR5643663five period of Gastrodia elata26.900
SRR5643664five period of Gastrodia elata33.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.670
SRR6049655Rhizomagastrodiae_C368-T10_good_14.640
SRR6049656Rhizomagastrodiae_C368-T07_good_15.400
SRR6049657Rhizomagastrodiae_C368-T07_good_13.750
SRR6049658Rhizomagastrodiae_C368-T04_good_11.990
SRR6049659Rhizomagastrodiae_C368-T04_good_12.180
SRR6049660Rhizomagastrodiae_C368-T01_good_11.790
SRR6049661Rhizomagastrodiae_C368-T04_good_11.910
SRR6049662Rhizomagastrodiae_C368-T01_good_11.430
SRR6049663Rhizomagastrodiae_C368-T01_good_12.770
SRR6049664Rhizomagastrodiae_C368-T10_good_13.500
SRR6049665Rhizomagastrodiae_C368-T10_good_13.500
SRP279888GastroGastrodia elata tuber 27.01
JuvenJuvenile tuber3.16
Mother_GastroMother tuber of Gastrodia elata 8.75
Mother_JuvenMother tuber of Juvenile 4.50