Detail information of GWHGAAEX015165/evm.TU.scaffold_64.161


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|1.00E-27serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|431811172|gb|AGA83664.1|0calcium-dependent protein kinase 1 [Dendrobium catenatum]
Swissprottr|P53683|CDPK2_ORYSJ0Calcium-dependent protein kinase isoform 2
trEMBLtr|L0GEV0|L0GEV0_9ASPA0Calcium-dependent protein kinase 1 {ECO:0000313|EMBL:AGA83664.1}
TAIRAT1G507000calcium-dependent protein kinase 33

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006735312393537998-
Transcript Sequence

Network for GWHGAAEX015165

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase673245.60E-75
PF13499.5EF-hand_73724322.80E-10
PF13499.5EF-hand_74425044.00E-12
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms67.040
SRR2545915Juvenile tuber76.160
SRP108465SRR5643513five period of Gastrodia elata60.810
SRR5643514five period of Gastrodia elata32.680
SRR5643515five period of Gastrodia elata84.980
SRR5643524five period of Gastrodia elata46.990
SRR5643525five period of Gastrodia elata115.250
SRR5643528five period of Gastrodia elata86.050
SRR5643658five period of Gastrodia elata76.450
SRR5643659five period of Gastrodia elata86.160
SRR5643660five period of Gastrodia elata73.300
SRR5643661five period of Gastrodia elata102.010
SRR5643662five period of Gastrodia elata106.510
SRR5643663five period of Gastrodia elata78.390
SRR5643664five period of Gastrodia elata131.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.280
SRR6049655Rhizomagastrodiae_C368-T10_good_149.990
SRR6049656Rhizomagastrodiae_C368-T07_good_149.760
SRR6049657Rhizomagastrodiae_C368-T07_good_161.590
SRR6049658Rhizomagastrodiae_C368-T04_good_153.590
SRR6049659Rhizomagastrodiae_C368-T04_good_174.470
SRR6049660Rhizomagastrodiae_C368-T01_good_176.680
SRR6049661Rhizomagastrodiae_C368-T04_good_159.020
SRR6049662Rhizomagastrodiae_C368-T01_good_141.390
SRR6049663Rhizomagastrodiae_C368-T01_good_169.040
SRR6049664Rhizomagastrodiae_C368-T10_good_140.890
SRR6049665Rhizomagastrodiae_C368-T10_good_140.890
SRP279888GastroGastrodia elata tuber 63.40
JuvenJuvenile tuber39.58
Mother_GastroMother tuber of Gastrodia elata 132.34
Mother_JuvenMother tuber of Juvenile 123.07